G1587741


Basic Information

Item Value
gene id G1587741
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8734841 ~ 8735293 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1817959
cgcaaaagttcaagggggccgaatactttcgcaactcactccagttctctgctgcctgtgactggaacgaattgcaaaaatcgctgaagttggagacttgtatctccctcaccaacttcaaacatctgctatctgagcagctaaccgatcgctgcagctgtacatagtctctcggtaaacagcccacccaactttacctacctcatccccatactgtttttatgtatgtacttttctgctcttttgcacaccaatatctctacctgtacatgaccatctgataatttatcactccagtgttaatctgcataattgtaattattcgcctaccttctcatgccttttgcacacaatgtatatagactcccctttttttctactgtgttactgacttgttaattgtttactccatgtgtaactctgtgttgtctgttcacactgctatgctttatc

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1817959 True 453 lncRNA 0.42 1 8734841 8735293

Neighbor

gene id symbol gene type direction distance location
LOC110497213 LOC106610529 coding upstream 27154 8670919 ~ 8707687 (+)
LOC118941439 NA coding upstream 91220 8640309 ~ 8643621 (+)
LOC110497214 LOC106610534 coding upstream 94617 8627294 ~ 8640224 (+)
LOC110498609 LOC106610517 coding upstream 107995 8611926 ~ 8626846 (+)
LOC110534718 NA coding upstream 125497 8608164 ~ 8609344 (+)
LOC118941440 LOC106577279 coding downstream 48574 8778760 ~ 8802053 (+)
LOC118941441 NA coding downstream 84849 8820142 ~ 8824446 (+)
vwa11 LOC106610525 coding downstream 139816 8875109 ~ 8904658 (+)
LOC110518381 LOC106610525 coding downstream 174167 8909460 ~ 8953635 (+)
LOC110497233 LOC106602251 coding downstream 225306 8960599 ~ 8981315 (+)
G1587738 NA non-coding upstream 9605 8724863 ~ 8725236 (+)
LOC118941438 LOC106610528 non-coding upstream 11758 8713686 ~ 8741009 (+)
G1587720 NA non-coding upstream 68482 8665669 ~ 8666359 (+)
G1587712 LOC106610491 non-coding upstream 80192 8654182 ~ 8654649 (+)
G1587751 NA non-coding downstream 71193 8806486 ~ 8807944 (+)
G1587799 NA non-coding downstream 186967 8922260 ~ 8937642 (+)
G1587824 NA non-coding downstream 221809 8957102 ~ 8957976 (+)
G1587831 NA non-coding downstream 236144 8971437 ~ 8973548 (+)
G1586672 NA other upstream 1678372 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2372529 6361848 ~ 6362312 (+)
G1585983 NA other upstream 2564014 6169580 ~ 6170827 (+)
G1585804 NA other upstream 2921988 5808978 ~ 5812853 (+)
G1585483 NA other upstream 3019466 5643756 ~ 5715375 (+)
G1587727 LOC106598223 other downstream 4251 8739544 ~ 8844780 (+)
G1587790 LOC106610525 other downstream 165693 8900986 ~ 8947363 (+)
G1587805 LOC106602251 other downstream 258161 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 607566 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 688472 9422781 ~ 9425478 (+)

Expression


Co-expression Network