G1587790 (LOC106610525)


Basic Information

Item Value
gene id G1587790
gene name LOC106610525
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 8900986 ~ 8947363 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1818036
TGGAAGACATGGGCAATGGGAAGTTCCTAGTTACGGTAACCAAGGTCCCTGCGGGGGAGTTTGTGGTGCTGTTGAACGGGACAGACGTGGTCTCCTCCACCGTGTTCCAGAGACAGTCCACCACTCAGATGTCTGTCTCCAAGGTTACCATCAAGGCCGTGGTGGACAGAAGCATGGAGCCTGGTAAACCCTTCACCCTTCCCTTCACCGTCATGACCGACACCACTGGAGGCAGTTACAAAATCAGTGCCAGAAACGACAGAGACTTCAAAATGAACGTCCCCGGCAGCATCGCTGTGACCACCGGAGGAAACGCCACCGGTGAACTGACCATCACGGTGCCCGCCAACACACCCTCAGGAACAGACGTCACCCTGACCATCGAGGCTGTGGCGCCCGGGGCCACCGCCGACTCCAATTACGCTGTCCTGCG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1818036 True 433 TUCP 0.58 4 8900986 8947363

Neighbor

gene id symbol gene type direction distance location
LOC118941441 NA coding upstream 76540 8820142 ~ 8824446 (+)
LOC118941440 LOC106577279 coding upstream 99729 8778760 ~ 8802053 (+)
LOC118941438 LOC106610528 coding upstream 159977 8713686 ~ 8741009 (+)
LOC110497213 LOC106610529 coding upstream 193299 8670919 ~ 8707687 (+)
LOC118941439 NA coding upstream 257365 8640309 ~ 8643621 (+)
LOC110497233 LOC106602251 coding downstream 13236 8960599 ~ 8981315 (+)
LOC110497235 LOC106610498 coding downstream 36976 8984339 ~ 8994686 (+)
LOC118936441 LOC106610520 coding downstream 62415 9009778 ~ 9015559 (+)
LOC110497247 LOC106610465 coding downstream 80282 9027645 ~ 9033977 (+)
LOC110498615 LOC106602251 coding downstream 105576 9052939 ~ 9064376 (+)
G1587751 NA non-coding upstream 93042 8806486 ~ 8807944 (+)
G1587741 NA non-coding upstream 165693 8734841 ~ 8735293 (+)
G1587738 NA non-coding upstream 175750 8724863 ~ 8725236 (+)
G1587824 NA non-coding downstream 9739 8957102 ~ 8957976 (+)
G1587831 NA non-coding downstream 24074 8971437 ~ 8973548 (+)
G1587814 NA non-coding downstream 88260 9035623 ~ 9037395 (+)
G1587807 NA non-coding downstream 127744 9075107 ~ 9084300 (+)
G1587727 LOC106598223 other upstream 56206 8739544 ~ 8844780 (+)
G1586672 NA other upstream 1844517 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2538674 6361848 ~ 6362312 (+)
G1585983 NA other upstream 2730159 6169580 ~ 6170827 (+)
G1585804 NA other upstream 3088133 5808978 ~ 5812853 (+)
G1587805 LOC106602251 other downstream 46091 8993454 ~ 9063965 (+)
G1588177 LOC106610450 other downstream 395496 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 476402 9422781 ~ 9425478 (+)
G1588532 LOC106610266 other downstream 863685 9798537 ~ 9814485 (+)
LOC110534552 LOC106602324 other downstream 882093 9829419 ~ 9847684 (+)

Expression


Co-expression Network