Gene
RNA
| Item | Value |
|---|---|
| gene id | G1587805 |
| gene name | LOC106602251 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 8993454 ~ 9063965 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| zinc finger protein 180-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1818058 | True | 972 | TUCP | 0.58 | 3 | 8993454 | 9063965 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497233 | LOC106602251 | coding | upstream | 12139 | 8960599 ~ 8981315 (+) |
| LOC110518381 | LOC106610525 | coding | upstream | 39819 | 8909460 ~ 8953635 (+) |
| vwa11 | LOC106610525 | coding | upstream | 88796 | 8875109 ~ 8904658 (+) |
| LOC118941441 | NA | coding | upstream | 169008 | 8820142 ~ 8824446 (+) |
| LOC118941440 | LOC106577279 | coding | upstream | 192197 | 8778760 ~ 8802053 (+) |
| LOC110497243 | LOC106610480 | coding | downstream | 2349 | 9066314 ~ 9068577 (+) |
| LOC118941446 | NA | coding | downstream | 97844 | 9161809 ~ 9173405 (+) |
| LOC110534503 | LOC106602246 | coding | downstream | 158325 | 9125724 ~ 9291739 (+) |
| LOC110534506 | LOC106610450 | coding | downstream | 278888 | 9342853 ~ 9344549 (+) |
| LOC110533188 | NA | coding | downstream | 289756 | 9353721 ~ 9354705 (+) |
| G1587831 | NA | non-coding | upstream | 19906 | 8971437 ~ 8973548 (+) |
| G1587824 | NA | non-coding | upstream | 35478 | 8957102 ~ 8957976 (+) |
| G1587799 | NA | non-coding | upstream | 55812 | 8922260 ~ 8937642 (+) |
| G1587751 | NA | non-coding | upstream | 185510 | 8806486 ~ 8807944 (+) |
| G1587807 | NA | non-coding | downstream | 11142 | 9075107 ~ 9084300 (+) |
| G1587868 | LOC100136185 | non-coding | downstream | 23703 | 9087668 ~ 9090046 (+) |
| G1587882 | NA | non-coding | downstream | 46641 | 9110606 ~ 9110847 (+) |
| G1587883 | NA | non-coding | downstream | 50267 | 9114232 ~ 9114459 (+) |
| G1588108 | NA | non-coding | downstream | 56591 | 9120556 ~ 9121439 (+) |
| G1587790 | LOC106610525 | other | upstream | 46091 | 8900986 ~ 8947363 (+) |
| G1587727 | LOC106598223 | other | upstream | 148674 | 8739544 ~ 8844780 (+) |
| G1586672 | NA | other | upstream | 1936985 | 7054845 ~ 7056469 (+) |
| G1586200 | NA | other | upstream | 2631142 | 6361848 ~ 6362312 (+) |
| G1585983 | NA | other | upstream | 2822627 | 6169580 ~ 6170827 (+) |
| G1588177 | LOC106610450 | other | downstream | 278894 | 9342859 ~ 9413146 (+) |
| LOC110514468 | LOC106602219 | other | downstream | 359800 | 9422781 ~ 9425478 (+) |
| G1588532 | LOC106610266 | other | downstream | 747083 | 9798537 ~ 9814485 (+) |
| LOC110534552 | LOC106602324 | other | downstream | 765491 | 9829419 ~ 9847684 (+) |
| G1588675 | NA | other | downstream | 1068926 | 10132891 ~ 10135488 (+) |
