G1587814


Basic Information

Item Value
gene id G1587814
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 9035623 ~ 9037395 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1818068
acatttctgacaagttataaatagctctctaaggtgtgcaatgactaacatgacaagaggaactgatgatgtaCTACCCAATTTTGAAATTACACCTTGTGCATTCTCACTATTACAACTTTCAGAGCTGGACTGAGTATATACAGGGCCTTCGGAAaggattcataccccttgactttttcaaatttgttacgttacagccttgattaaataaattaaaatccacagcaatctacacagaataccccataatgacaaaccgaaaacaggtttttagaaatttgtgcaaatgtatcagaccatttgctatgagactcgaaattgagctcaggtgcatcctgtttccattgatcatccttgagatgtttctacaacttgattggattccacccgtggtaaattcaattgattggacatgatttggaaaaggtcccacagttgacagtgcatgtcagagcaaaaaccaagccctggaggtcaaaggaattgtccgtagagcgccgagacaggattgtgtcgagactcagatcttgggaagggtaccaaaacatttctgcagcatagaAGGTCCACAAGTACACAGTGGCCCCCATCAttcttcctagtgctggccgcccggccaaactgagcaatcgggtgagaagggccttggtcagggagctccggagttcctctgtagagatgggagaacattccagaagggcagccatctctgcagcactccaccaataggcctttatggtagtggccatacagaagccattcctcagtaaaaggcacgacagcccgcttggagtttgccaaaaggcacctaaagactctcagaccatgagaaacaatattatctgatctaatgaaaccaagattgaactctggtcTGAATGCCAGATCACTGtagctgtacacagccaatctgtaaatagcacacccaactacctcatccccatattatttatcctcttgctcttttgcaccccagtatctctacttgcacatcatcatcggcacatctatcactccagtgttaatgctaaattgtaataatttcacctctatggcctatttattgccttacctccctactcttttAAATTTGCACACGCTGtttacagatttttctattgtgttattgactgtacgtctgtttatgtgtaactttgtgttgttgtttttgtcgcactgctttgctttatcttggccaggtcgcagttgtaaatgagaacttcttctcaactggcctgcctggttaaataaaggtgaaataaagaaataaaaagccAAGCTTCACATCTAACCTGCCACCACCCATACGGTGAAGCActgtggtggaagcatcatgctgtggggatgttgttcaggatcgagggaaagatcaacggagcaaagtacatagcAATCCTTAATGTAAACCTGCTCGcaagcgctcaggaccttagactgttGGCGAAGTTTCaccctccaacaggacaacgacccgaagcacacagccaagacaagacttgaacctgatcaaacatctctggagagacctgaaaatagctgtgcagcaacactccccatcattatggggtattgtgtgtagattgatgaggggaaaaaaaacaatcaattttGCAAGGCtgtaagtaacaaaatgtggaaaaagtcatgaggtttgaatactttccgaaggcactgtatgtatgtatgtatatacacacactaccggtcaagagttttagaacacctacacaCCAAGGG

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1818068 True 1740 lncRNA 0.43 2 9035623 9037395

Neighbor

gene id symbol gene type direction distance location
LOC110497247 LOC106610465 coding upstream 1646 9027645 ~ 9033977 (+)
LOC118936441 LOC106610520 coding upstream 20064 9009778 ~ 9015559 (+)
LOC110497235 LOC106610498 coding upstream 40937 8984339 ~ 8994686 (+)
LOC110497233 LOC106602251 coding upstream 54308 8960599 ~ 8981315 (+)
LOC110518381 LOC106610525 coding upstream 81988 8909460 ~ 8953635 (+)
LOC110498615 LOC106602251 coding downstream 15544 9052939 ~ 9064376 (+)
LOC110497243 LOC106610480 coding downstream 28919 9066314 ~ 9068577 (+)
LOC118941446 NA coding downstream 124414 9161809 ~ 9173405 (+)
LOC110534503 LOC106602246 coding downstream 184895 9125724 ~ 9291739 (+)
LOC110534506 LOC106610450 coding downstream 305458 9342853 ~ 9344549 (+)
G1587831 NA non-coding upstream 62075 8971437 ~ 8973548 (+)
G1587824 NA non-coding upstream 77647 8957102 ~ 8957976 (+)
G1587799 NA non-coding upstream 97981 8922260 ~ 8937642 (+)
G1587751 NA non-coding upstream 227679 8806486 ~ 8807944 (+)
G1587807 NA non-coding downstream 37712 9075107 ~ 9084300 (+)
G1587868 LOC100136185 non-coding downstream 50273 9087668 ~ 9090046 (+)
G1587882 NA non-coding downstream 73211 9110606 ~ 9110847 (+)
G1587883 NA non-coding downstream 76837 9114232 ~ 9114459 (+)
G1588108 NA non-coding downstream 83161 9120556 ~ 9121439 (+)
G1587790 LOC106610525 other upstream 88260 8900986 ~ 8947363 (+)
G1587727 LOC106598223 other upstream 190843 8739544 ~ 8844780 (+)
G1586672 NA other upstream 1979154 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2673311 6361848 ~ 6362312 (+)
G1585983 NA other upstream 2864796 6169580 ~ 6170827 (+)
G1588177 LOC106610450 other downstream 305464 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 386370 9422781 ~ 9425478 (+)
G1588532 LOC106610266 other downstream 773653 9798537 ~ 9814485 (+)
LOC110534552 LOC106602324 other downstream 792061 9829419 ~ 9847684 (+)
G1588675 NA other downstream 1095496 10132891 ~ 10135488 (+)

Expression


Co-expression Network