G1587807


Basic Information

Item Value
gene id G1587807
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 9075107 ~ 9084300 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1818060
ACACGTTTATTACAAGACTATAAAATAGTTATTACAAGTTGCAGCGACTCATGTGGATAAGCATGAAAGGCTGTATACAAACTCCTAAATTCAGGAGCTTACTTAAAGGGATTGTTCACCCAAATGACTAAAGTACACACTGGTTTCCTtcccctgtaagcagtctatgacaaggtatgacagcaatgcTTTGGTTTCCAGTCGCTAACCAGTTGCTAACGCTTTTGCATTTCTGGCAAAAATCTCATTCAAGTCATGGTCAAACattagcatttggaaacagtgccaggggtAATGAACCAAAACATGGAtggctgtcataccttgtccatggACTGCTTACAGGGGAAGGAAACCAGTATGTTATTTTGCAAtttgagtgaactatccctttaatgcaCCTAGTTGCAGGTTTTTATTTAGGTTAGGTACACAATGGATAGATTCCGTGGAGAGATATCACACATCACTCAGTTAGTTTAGTTGAACACAGCAAACAGTGAACCAGGCCCACAGGCAAATACAATATAACTGCAGAAAGTAAAGCTCAATGGTCAAATATTAGCCTTCCCCTTCAAATGCACAGACAGattataatacatcataacaatCCAATCACCGCTTGTGCATTCTACTTTGTTGGCCTCCAAGCTGTCACACCAAGGAAGCAAACAACAATAGTCTTTACTTTACTCTTAGTTTATCAAAATGCTCATCTAACAATTCACTAAAAACTCAACTGTTCCAGTTGGCAGCTTGGAGTCCAGCAGCAGCTTCTCCCTGATCCAGCTTGTGTCCAGAGCACACAATGTGCTCTACTTTTATAGGAAGGGGAACAGGTCTGCTTAATCACTTTGTTAACCTGAAAGTAACCAGACAAAGGGAATCTACCCAGGGGTATATTCAATGCAATAGCAACACAGGGCTATCTTCACCTTGTTACACTCCCCCTGTCCTTTCAGCTTCCTGCAGATTTGTTTACTCTGTACATCAACATGTTCAGGAGCTCCAGGACTACAAACATGGGTCATTATAATGTCCATACAATAGATTTTACACTTCACGCTTGCTCCAACTGGATATTGAGGGTTGGGTAGGCTTAACCAGTGAGGACGCAATGGCAAAAGACACCACCGGGGCTCTCGTCTCTCTTAATGAATCCGATTGGTCGAGGAGTTTTTGAGTGACAGCTGGTTGAACCACTGAAaaggtccttgattatcttttggGACCCATGTAGGAGATCAACAGACAAATATGAGCATTTGATATTGTGTTCATACTGTATGTAACTCGACAACAAAGACTGACTGTCAAAGATAATAAAGTAACTTGATTGGTGATACAGTAAACTCCTGATCCAGTGTGCTGAATGTAAATATGGTTCGGGACTGTTGAGAATCTTTGCATTAAATCGAAGCATGAAAATATCTGTAGCAGTTAAGAAGAATATACTTGAGTGACATCACTTCCAGTCTTGTCAACTTGAACTGTTAGAGCCTTATTTCCTGCACAAACCTTCAAAATAGTCGACAGGTCTACCATCTCTTCTGTCTGGTACTACAGTGGGGGCctaaaattattgacacccttgatgaGCAATAACGACagtgtaaaataaataattaaaatactgagctatattgtatgctcaaaaaaATTGCACAATTATATTATTTCATACTAATACAATTAGTAATCAGAGAactatatatttgtttaacaagtaattttTATTTTTCTCAAAAAGGTAAGGGTCAAGGTGATTGACTCCCCTAAAGATTCTACCCAATAAAGTAGTCCAAAGTATTTTTTGACTACTTtatagtatttggtcccatattcttaGCATGCAATGACAACATcgagcttgtgactctacacactTGTTGGATGCATATGCAGTTCATTTAGGTTGTGTTTTAgatgattttgtgcccaatagaaatgcatggtaaataatgtattgtgtcattttggagtcacttttattgcaaataagaataaaccatgtttctaaacacttctacattcatgtgggtgCTACCATGGTTACGGATAATCCTTGTTGTTTACAAAGCGTGTGacgaataaaatttgattttgtgTATTTTTCTCTCTGTTCTAGAAACCACTATCACTTAGAATTTCACTAGTCCACTTCctggctgatgtgtgtgtgtgtcttgagtgTAGTAATACATGTGTGAactgtgtatctgtctctatTGATCCAGTATCCCTACacatatggtactggaactgaccctgtatatagtacgcTTACTTACTTTGTGttctttcttctttcttctttttatatcgtgtgtgtttttgttctaccttgttatttttagtattacattgttattgagtCCTGCATTTCTGGGGTTAGAGCTTGAAGGAAAGGCATTTTaatgtacttgtgcatgtgacatatTAAAAACTTGGAACTACCGGTCATTTCCGTCCTCTAACCGGGATGCTGGGACAGTTGCACCTATAATCTAAACCAGCACCTTTATCAGAGACCACCACATGGTGACACTCTTTTTCACAGTTTgtttctcacacacactgactacaTTTTACAAGTTCGTATAGGCTAATAACCAGTTACTCTCATGTTTCGGTAGCCTAAAGGAAAACAGTGACATTTTGAGGAAAGACATGCTTAAGGAAAAGAAGAGTAAGCATTTAGGAGTAATGATGAACCCAGACACTGCCACCGTGTTTTCGGATAGGCCTGCATCAAACAAAACACAGAACGATTTGATTGAAGCATTTTCTAATGTAAGGACAGACGGATGGACTTCATTTACAAGTACAGGTAGACCTAAACGCATTTCCCAGGGATAGGCTACTGTTGACATTGTGACCTGTTGTCTTTGCTGCTCATTTCAGATCGATCCGTGTTGGATAAAGCTACAGGACCCAACGTTTTTTTAGGGTGATCTGGTGTTGGATGTGCGACGCTCCTCTTTCGTGTTTGATGATGCCCCGTAATAAGACGACGCAATCTGACTCCATAAAGATGAATAGTAAAGTGCAACCGAGACTCTTAAGGAGCTACAGGAACAGACTATCAAGAAAGGTCTGAGAATTGTCTATCAAAGGCAAATGGGTTTAATATCATTGTAAAAATGAACGATTGCATTACAAGGCAATACTGCAGCAGAGTGACATTGAGTGATCCTGGGACGGCCTCTTCGTCTCAATAGTATGTCTCTTGGTACACCCAACCTGAAAGAAGAGACAATTCCCGAGAGAAGAAACAAATTAGTTCGAGTTCATCTTGCCACACTGCAAATCTCCACGAGACAAATGATAAAATACCGCACTCCCAATCTTACATGTCATTGTCACGTTCTTGTACAATAATTGACAGTGACGGCCAATTGTCGGCGTTAACTTAAAAACTTGTTGTCGTCTGTAGACCCTGAGCACGTACCTCCTGAGTTCCGTCGCATGATGTATTTTCTAACCTCATCATAGATGAAGATGAGCAGGGTGTAGGGAAAGGCACATACCCACCAGAAAGGTTGAGTGGGTACATTCTGATGGCAATGTCCATTCCAGGGCAGTAGGACAGGAAGAGAGCCAGGGCGGATTCTGAACAAAGTCCGAAGATGAGAACACGGTTTCATTAGTCCCTGCTGAAAGAAGGAGTTCTTCCTGGTCTTACAGACGATCAATACGGCCCACTGTGCAATCACAACAGCGGCGAAGTACGCTGTGTGGCAGCTGAACTCAATTATCTTTCTGCTCTCATATGTCTGAAggataaggggagagagagagaggggggagtgagagagagagagggggagagagagagagcaagagggggagagagagagagagagagagagagagagggggagagagagtgggggagagagagagagagagagagtgggggagagagagagaga
>TU1818061
ACACGTTTATTACAAGACTATAAAATAGTTATTACAAGTTGCAGCGACTCATGTGGATAAGCATGAAAGGCTGTATACAAACTCCTAAATTCAGGAGCTTACTTAAAGGGATTGTTCACCCAAATGACTAAAGTACACACTGGTTTCCTtcccctgtaagcagtctatgacaaggtatgacagcaatgcTTTGGTTTCCAGTCGCTAACCAGTTGCTAACGCTTTTGCATTTCTGGCAAAAATCTCATTCAAGTCATGGTCAAACattagcatttggaaacagtgccaggggtAATGAACCAAAACATGGAtggctgtcataccttgtccatggACTGCTTACAGGGGAAGGAAACCAGTATGTTATTTTGCAAtttgagtgaactatccctttaatgcaCCTAGTTGCAGGTTTTTATTTAGGTTAGGTACACAATGGATAGATTCCGTGGAGAGATATCACACATCACTCAGTTAGTTTAGTTGAACACAGCAAACAGTGAACCAGGCCCACAGGCAAATACAATATAACTGCAGAAAGTAAAGCTCAATGGTCAAATATTAGCCTTCCCCTTCAAATGCACAGACAGattataatacatcataacaatCCAATCACCGCTTGTGCATTCTACTTTGTTGGCCTCCAAGCTGTCACACCAAGGAAGCAAACAACAATAGTCTTTACTTTACTCTTAGTTTATCAAAATGCTCATCTAACAATTCACTAAAAACTCAACTGTTCCAGTTGGCAGCTTGGAGTCCAGCAGCAGCTTCTCCCTGATCCAGCTTGTGTCCAGAGCACACAATGTGCTCTACTTTTATAGGAAGGGGAACAGGTCTGCTTAATCACTTTGTTAACCTGAAAGTAACCAGACAAAGGGAATCTACCCAGGGGTATATTCAATGCAATAGCAACACAGGGCTATCTTCACCTTGTTACACTCCCCCTGTCCTTTCAGCTTCCTGCAGATTTGTTTACTCTGTACATCAACATGTTCAGGAGCTCCAGGACTACAAACATGGGTCATTATAATGTCCATACAATAGATTTTACACTTCACGCTTGCTCCAACTGGATATTGAGGGTTGGGTAGGCTTAACCAGTGAGGACGCAATGGCAAAAGACACCACCGGGGCTCTCGTCTCTCTTAATGAATCCGATTGGTCGAGGAGTTTTTGAGTGACAGCTGGTTGAACCACTGAAaaggtccttgattatcttttggGACCCATGTAGGAGATCAACAGACAAATATGAGCATTTGATATTGTGTTCATACTGTATGTAACTCGACAACAAAGACTGACTGTCAAAGATAATAAAGTAACTTGATTGGTGATACAGTAAACTCCTGATCCAGTGTGCTGAATGTAAATATGGTTCGGGACTGTTGAGAATCTTTGCATTAAATCGAAGCATGAAAATATCTGTAGCAGTTAAGAAGAATATACTTGAGTGACATCACTTCCAGTCTTGTCAACTTGAACTGTTAGAGCCTTATTTCCTGCACAAACCTTCAAAATAGTCGACAGGTCTACCATCTCTTCTGTCTGGTACTACAGTGGGGGCctaaaattattgacacccttgatgaGCAATAACGACagtgtaaaataaataattaaaatactgagctatattgtatgctcaaaaaaATTGCACAATTATATTATTTCATACTAATACAATTAGTAATCAGAGAactatatatttgtttaacaagtaattttTATTTTTCTCAAAAAGGTAAGGGTCAAGGTGATTGACTCCCCTAAAGATTCTACCCAATAAAGTAGTCCAAAGTATTTTTTGACTACTTtatagtatttggtcccatattcttaGCATGCAATGACAACATcgagcttgtgactctacacactTGTTGGATGCATATGCAGTTCATTTAGGTTGTGTTTTAgatgattttgtgcccaatagaaatgcatggtaaataatgtattgtgtcattttggagtcacttttattgcaaataagaataaaccatgtttctaaacacttctacattcatgtgggtgCTACCATGGTTACGGATAATCCTTGTTGTTTACAAAGCGTGTGacgaataaaatttgattttgtgTATTTTTCTCTCTGTTCTAGAAACCACTATCACTTAGAATTTCACTAGTCCACTTCctggctgatgtgtgtgtgtgtcttgagtgTAGTAATACATGTGTGAactgtgtatctgtctctatTGATCCAGTATCCCTACacatatggtactggaactgaccctgtatatagtacgcTTACTTACTTTGTGttctttcttctttcttctttttatatcgtgtgtgtttttgttctaccttgttatttttagtattacattgttattgagtCCTGCATTTCTGGGGTTAGAGCTTGAAGGAAAGGCATTTTaatgtacttgtgcatgtgacatatTAAAAACTTGGAACTACCGGTCATTTCCGTCCTCTAACCGGGATGCTGGGACAGTTGCACCTATAATCTAAACCAGCACCTTTATCAGAGACCACCACATGGTGACACTCTTTTTCACAGTTTgtttctcacacacactgactacaTTTTACAAGTTCGTATAGGCTAATAACCAGTTACTCTCATGTTTCGGTAGCCTAAAGGAAAACAGTGACATTTTGAGGAAAGACATGCTTAAGGAAAAGAAGAGTAAGCATTTAGGAGTAATGATGAACCCAGACACTGCCACCGTGTTTTCGGATAGGCCTGCATCAAACAAAACACAGAACGATTTGATTGAAGCATTTTCTAATGTAAGGACAGACGGATGGACTTCATTTACAAGTACAGGTAGACCTAAACGCATTTCCCAGGGATAGGCTACTGTTGACATTGTGACCTGTTGTCTTTGCTGCTCATTTCAGATCGATCCGTGTTGGATAAAGCTACAGGACCCAACGTTTTTTTAGGGTGATCTGGTGTTGGATGTGCGACGCTCCTCTTTCGTGTTTGATGATGCCCCGTAATAAGACGACGCAATCTGACTCCATAAAGATGAATAGTAAAGTGCAACCGAGACTCTTAAGGAGCTACAGGAACAGACTATCAAGAAAGGTCTGAGAATTGTCTATCAAAGGCAAATGGGTTTAATATCATTGTAAAAATGAACGATTGCATTACAAGGCAATACTGCAGCAGAGTGACATTGAGTGATCCTGGGACGGCCTCTTCGTCTCAATAGTATGTCTCTTGGTACACCCAACCTGAAAGAAGAGACAATTCCCGAGAGAAGAAACAAATTAGTTCGAGTTCATCTTGCCACACTGCAAATCTCCACGAGACAAATGATAAAATACCGCACTCCCAATCTTACATGTCATTGTCACGTTCTTGTACAATAATTGACAGTGACGGCCAATTGTCGGCGTTAACTTAAAAACTTGTTGTCGTCTGTAGACCCTGAGCACGTACCTCCTGAGTTCCGTCGCATGATGTATTTTCTAACCTCATCATAGATGAAGATGAGCAGGGTGTAGGGAAAGGCACATACCCACCAGAAAGGTTGAGTGGGTACATTCTGATGGCAATGTCCATTCCAGGGCAGTAGGACAGGAAGAGAGCCAGGGCGGATTCTGAACAAAGTCCGAAGATGAGAACACGGTTTCATTAGTCCCTGCTGAAAGAAGGAGTTCTTCCTGGTCTTACAGACGATCAATACGGCCCACTGTGCAATCACAACAGCGGCGAAGTACGCTGTGTGGCAGCTGAACTCAATTATCTTTCTGCTCTCATATGTCTGAAggataaggggagagagagagaggggggagtgagagagagagagggggagagagagagagcaagaggggagagagagagagagagagagggggagagatgtggGTAGATAGGGAaacagaggggagaaggaggaacgGAACGTGTTTATTACAATGTTACTAAATGTGTGGTGAGAATATGAGCAAGCGACAGCAGTGGAATCCACAAGTGCACAAATGGAAGAATAGTAGCAAGCTGTCTACGAAGCCCAAAGCACGGAGAGGACGTTGGGGGTTGTGTGGTGCAGGGCCGAGGCTACAGACCTGTCTCTCTGGCAGTGACTGTTCGTCCACTGACTATCTGAAATGCAAGCTGTGCAACAACCCTGATCCATAATCCCAGCCATGGCTTCCAAACTTTTTTTAATACTATATcacatttattgatttatttagtTTTCTTGAATGTCCTGATGGAATAAACTTACTGGAATGAACAAAATCTAAAAAATGGGAGAGACTGAAAAAGTTCAAATGGAGAACTCATCACACAAGAAGGTACTCAAAACAAGGCTAATGCTAATCCCTTCATATAAATGTAATAGAACAGGCTAGGAGCTATAaacctggcaatttgactggtaaactgaTGCCAGCCCATctattatgccatcattgacttgaatggagaTGCcctttctattcattctatttctatgaatcCGTTAGTAAGATAGCAGTACTCAGTAGCAGTACTCACCCACTGCTGGCCGTAGCTGTCCTCCAAGTCGTTGATATACTGGTTTTGCCTTGGAGCAAGATGGTGGAGCAGCTGTCCAGGATCCTCTCAGGGGCTCCCTTCATCACAAGCAGATGATTGGACTCGCCGGCCATGTTGTTCTCATGAATGGAGAGCTAGTGGAAGATGAGATGACACCATGAAGAGGGCTGACTTTATTT

Function

NR:

description
Na/K ATPase alpha subunit isoform 1a

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1818060 False 3935 lncRNA 0.41 3 9075107 9080299
TU1818061 True 4719 lncRNA 0.41 5 9075107 9084300

Neighbor

gene id symbol gene type direction distance location
LOC110497243 LOC106610480 coding upstream 6530 9066314 ~ 9068577 (+)
LOC110498615 LOC106602251 coding upstream 10731 9052939 ~ 9064376 (+)
LOC110497247 LOC106610465 coding upstream 41130 9027645 ~ 9033977 (+)
LOC118936441 LOC106610520 coding upstream 59548 9009778 ~ 9015559 (+)
LOC110497235 LOC106610498 coding upstream 80421 8984339 ~ 8994686 (+)
LOC118941446 NA coding downstream 77509 9161809 ~ 9173405 (+)
LOC110534503 LOC106602246 coding downstream 137990 9125724 ~ 9291739 (+)
LOC110534506 LOC106610450 coding downstream 258553 9342853 ~ 9344549 (+)
LOC110533188 NA coding downstream 269421 9353721 ~ 9354705 (+)
LOC110516167 LOC106610451 coding downstream 308940 9393240 ~ 9409435 (+)
G1587814 NA non-coding upstream 37712 9035623 ~ 9037395 (+)
LOC110497233 LOC106602251 non-coding upstream 95413 8960599 ~ 8981315 (+)
G1587831 NA non-coding upstream 101559 8971437 ~ 8973548 (+)
G1587824 NA non-coding upstream 117131 8957102 ~ 8957976 (+)
G1587799 NA non-coding upstream 137465 8922260 ~ 8937642 (+)
G1587868 LOC100136185 non-coding downstream 3368 9087668 ~ 9090046 (+)
G1587882 NA non-coding downstream 26306 9110606 ~ 9110847 (+)
G1587883 NA non-coding downstream 29932 9114232 ~ 9114459 (+)
G1588108 NA non-coding downstream 36256 9120556 ~ 9121439 (+)
G1588109 LOC100194703 non-coding downstream 37487 9121787 ~ 9221582 (+)
G1587805 LOC106602251 other upstream 11142 8993454 ~ 9063965 (+)
G1587790 LOC106610525 other upstream 127744 8900986 ~ 8947363 (+)
G1587727 LOC106598223 other upstream 230327 8739544 ~ 8844780 (+)
G1586672 NA other upstream 2018638 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2712795 6361848 ~ 6362312 (+)
G1588177 LOC106610450 other downstream 258559 9342859 ~ 9413146 (+)
LOC110514468 LOC106602219 other downstream 339465 9422781 ~ 9425478 (+)
G1588532 LOC106610266 other downstream 726748 9798537 ~ 9814485 (+)
LOC110534552 LOC106602324 other downstream 745156 9829419 ~ 9847684 (+)
G1588675 NA other downstream 1048591 10132891 ~ 10135488 (+)

Expression


Co-expression Network