G1588177 (LOC106610450)


Basic Information

Item Value
gene id G1588177
gene name LOC106610450
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 9342859 ~ 9413146 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1818567
CCTGTATTCAGCCAGAGAGGAGGGACTgtgaaaataaacaaaaaaccACTGGTATAACAAGGCTCTCTAAAAGTTGAACATTTGAATGCTGATTCTGTATCTGAAAAGATAATTCATCTCCATTGCAAGTTGAAATTGGACCAATATATTTTGACATCATGGCAAGACACAAGATCCTCACCTTTACTGTGATGTATTTCTTCCAGGCTTGGACTTTGGGTGTGGACTCCAAGATGGTTCAtctccatcagcctggtctcaaTTCCAGCATACCCTTAGACATGGTCCCTGACTCTGTTGACGACATGTATAATGGCTGCACTGAACAAATGTACAACAAGGTGCAGAAGGAATATCTTCCAAATGAAATTAACAAAGTAGGGATCTTCAAACAAGCCTGGATGAAGGCAGAAGGATGTGCAACTATTGAGAATGTGAAGAAACGATTCCAAAAGGACAAGTCCAAGTACAATCCTAAAGAACTTCCACATGATCATATCAAGGCTATCTGTGCTTACTCAGGGGGTCAAAGTAAGATGTACCCAGTGTTCAACCAAGCAGTCCGGACCAGTAGAACAGAGTACACCACCTCCTTCCAGTTCCACTCCCTTCACTTCCTGCTGACTGACGCCATTCGCCTCCTGAAACTGAACCAAAAGTCCTGTCACACCACGTATCGAAGAACCAACATGGAGTTTGTTAGTAAAGTTAACAAAGAAATCAGATTTGGCTTCTTTGCCTCCAGCTCTCTCGACAAGGGTATTAGTACAAGATTTGGAGACAAGTCTTGCTTTGAGATAGAGACATGTTTTGGCGCTGACCTGAAGTCCTTCCCCAAACTGGGGAATCATGAAAAGGAGGTGTTGATTCCACCGTATGAAGTGTTCAGAGTTACTGCCGTGCTGAAGAAAGAGAA
>TU1818569
CCTGTATTCAGCCAGAGAGGAGGGACTgtgaaaataaacaaaaaaccACTGGTATAACAAGGCTCTCTAAAAGTTGAACATTTGAATGCTGATTCTGTATCTGAAAAGATAATTCATCTCCATTGCAAGTTGAAATTGGACCAATATATTTTGACATCATGGCAAGACACAAGATCCTCACCTTTACTGTGATGTATTTCTTCCAGGCTTGGACTTTGGGTGTGGACTCCAAGATGGTTCAtctccatcagcctggtctcaaTTCCAGCATACCCTTAGACATGGTCCCTGACTCTGTTGACGACATGTATAATGGCTGCACTGAACAAATGTACAACAAGGTGCAGAAGGAATATCTTCCAAATGAAATTAACAAAGTAGGGATCTTCAAACAAGCCTGGATGAAGGCAGAAGGATGTGCAACTATTGAGAATGTGAAGAAACGATTCCAAAAGGACAAGTCCAAGTACAATCCTAAAGAACTTCCACATGATCATATCAAGGCTATCTGTGCTTACTCAGGGGGTCAAAGTAAGATGTACCCAGTGTTCAACCAAGCAGTCCGGACCAGTAGAACAGAGTACACCACCTCCTTCCAGTTCCACTCCCTTCACTTCCTGCTGACTGACGCCATTCGCCTCCTGAAACTGAACCAAAAGTCCTGTCACACCACGTATCGAAGAACCAACATGGAGTTTGTTAGTAAAGTTAACAAAGAAATCAGATTTGGCTTCTTTGCCTCCAGCTCTCTCGACAAGGGTATTAGTACAAGATTTGGAGACAAGTCTTGCTTTGAGATAGAGACATGTTTTGGCGCTGACCTGAAGTCCTTCCCCAGTCTGGGGAATTATGAAAAGGAGGTGTTAATTCCACCAAATGAAGTG

Function

NR:

description
NAD(P)(+)--arginine ADP-ribosyltransferase 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1818567 False 916 TUCP 0.43 3 9342859 9413146
TU1818569 True 884 TUCP 0.43 3 9342859 9409298

Neighbor

gene id symbol gene type direction distance location
LOC110534503 LOC106602246 coding upstream 51120 9125724 ~ 9291739 (+)
LOC118941446 NA coding upstream 169454 9161809 ~ 9173405 (+)
LOC110497243 LOC106610480 coding upstream 274282 9066314 ~ 9068577 (+)
LOC110498615 LOC106602251 coding upstream 278483 9052939 ~ 9064376 (+)
LOC110497247 LOC106610465 coding upstream 308882 9027645 ~ 9033977 (+)
LOC110514468 LOC106602219 coding downstream 9635 9422781 ~ 9425478 (+)
LOC110533187 LOC106610415 coding downstream 15175 9428321 ~ 9429620 (+)
LOC118941452 LOC106602212 coding downstream 56807 9469953 ~ 9476982 (+)
LOC118941544 LOC106595224 coding downstream 310741 9723887 ~ 9725785 (+)
LOC110534552 LOC106602324 coding downstream 416273 9829419 ~ 9847684 (+)
G1588173 NA non-coding upstream 2558 9333485 ~ 9340301 (+)
G1588174 NA non-coding upstream 7599 9335016 ~ 9335260 (+)
G1588172 NA non-coding upstream 15011 9327441 ~ 9327848 (+)
G1588156 NA non-coding upstream 69770 9272760 ~ 9273089 (+)
G1588147 NA non-coding upstream 81031 9259533 ~ 9261828 (+)
G1588196 NA non-coding downstream 5805 9418951 ~ 9419822 (+)
G1588189 NA non-coding downstream 29896 9443042 ~ 9445527 (+)
G1588207 NA non-coding downstream 39705 9452851 ~ 9453191 (+)
G1588212 NA non-coding downstream 44256 9457402 ~ 9458945 (+)
G1588214 NA non-coding downstream 49068 9462214 ~ 9462731 (+)
G1587805 LOC106602251 other upstream 278894 8993454 ~ 9063965 (+)
G1587790 LOC106610525 other upstream 395496 8900986 ~ 8947363 (+)
G1587727 LOC106598223 other upstream 498079 8739544 ~ 8844780 (+)
G1586672 NA other upstream 2286390 7054845 ~ 7056469 (+)
G1586200 NA other upstream 2980547 6361848 ~ 6362312 (+)
G1588532 LOC106610266 other downstream 397902 9798537 ~ 9814485 (+)
G1588675 NA other downstream 719745 10132891 ~ 10135488 (+)
G1588690 LOC106610250 other downstream 754330 10167476 ~ 10169449 (+)

Expression


Co-expression Network