G1590992


Basic Information

Item Value
gene id G1590992
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 12198603 ~ 12199303 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1821822
TGAGTAGGACAAGACAACAACACTGAAGGACTAGGGCACTAATATTCACAGCTGGTATCCAGGTTTAGTGAGTAGGACAAGACAACATTACTGAAGGACTAGGGCACTAATATTCACAACTGGTATCCAGGTTTAGTGAGTAGGACAAGACAACATCACTGAAGGACTAGGGCACTAATATTCACAGCTGGTATCCAGGTTTAGTGAGTAGGACAAGACAACAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1821822 True 225 lncRNA 0.43 2 12198603 12199303

Neighbor

gene id symbol gene type direction distance location
mab21l2 LOC106602368 coding upstream 122594 12074092 ~ 12076009 (+)
LOC110498649 LOC106602362 coding upstream 271384 11817950 ~ 11927219 (+)
LOC110497374 LOC106610191 coding upstream 567226 11563384 ~ 11631377 (+)
LOC110497373 tmem184c coding upstream 650931 11541421 ~ 11547672 (+)
LOC110497371 LOC106610223 coding upstream 666354 11489498 ~ 11532249 (+)
rps3a rs3a coding downstream 73509 12272812 ~ 12276920 (+)
LOC118941553 NA coding downstream 75430 12274733 ~ 12274799 (+)
LOC118941562 NA coding downstream 76936 12276239 ~ 12276368 (+)
LOC110497380 LOC106602395 coding downstream 106497 12305800 ~ 12344209 (+)
dctpp1 xtp3a coding downstream 164782 12364085 ~ 12365542 (+)
G1590921 NA non-coding upstream 133895 12064387 ~ 12064708 (+)
G1590916 NA non-coding upstream 137226 12058493 ~ 12061377 (+)
G1590905 NA non-coding upstream 158169 12039559 ~ 12040434 (+)
G1590851 NA non-coding upstream 264019 11929680 ~ 11934584 (+)
G1590850 NA non-coding upstream 267024 11927902 ~ 11931579 (+)
G1591047 NA non-coding downstream 73196 12272499 ~ 12272701 (+)
G1591101 NA non-coding downstream 156080 12355383 ~ 12355814 (+)
G1591456 NA non-coding downstream 254449 12453752 ~ 12453990 (+)
G1591457 NA non-coding downstream 254901 12454204 ~ 12454415 (+)
G1590347 NA other upstream 683481 11514656 ~ 11515122 (+)
LOC110497369 lsm6 other upstream 971321 11225326 ~ 11227282 (+)
G1589200 NA other upstream 1611038 10587138 ~ 10587565 (+)
G1589189 NA other upstream 1629721 10562934 ~ 10568998 (+)
G1593802 NA other downstream 2473675 14672978 ~ 14673630 (+)
G1594135 NA other downstream 3097300 15296603 ~ 15296919 (+)
LOC110498496 LOC106602458 other downstream 3447188 15646177 ~ 15661620 (+)
G1594470 NA other downstream 3593713 15793016 ~ 15793593 (+)
LOC110498515 LOC106610069 other downstream 3600013 15799279 ~ 15887743 (+)

Expression


Co-expression Network