XLOC_003528 (dynlt3)


Basic Information

Item Value
gene id XLOC_003528
gene name dynlt3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 29790626 ~ 29794308 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006899
ACATCAGTCTGTTGTCAGTGAAAGAAAAGATACAGTCGTCTGAGTTTGCCGTCCagatttttggtgtttttttaaactgaaaaGATGGAGGAGTATCATTCTGGAGATGAAGTTTCTTTCAACCCAGATGATGCAAGTAATGTTGTAAAGGAGTGCATCGAGGGGATTATTGGTGGTGTGGACTACAGCCAGAACAAAGTCAACCAGTGGACGGCCAGCATAGTCGAGCACTCTCTCACTCAGTTAGTCAAACAAGGCAAACCCTTCAAATACATTGTCAACTGTGCTGTGATGCAGAAAAGCGGCGCAGGTCTTCACACAGCCAACTCTTGTTATTGGGACACTACCACTGACGgaaGTTGCACAGTGAGGTGGGAGAACCGGACTATGTATTGCGTCGTCAGTGTGTTTGCAGTGGCCATTGCACTATGAGCTGAGtcccacacatgcacacacacacacacacacacacacacactgaagatcAAAGCCAGCTTCACTCACATGTCTATTATTAAGCTTTTTGCTTCAACACATCGGCTTAAACATCAGCCATGTTCAGCTCCTGTCTGTTTGGCCTGATACAATGTTTAGACTGAATTGTAAGCTCTTATCTACTACAATGTATCTATATTTGCTTCTCTGTTTTTGGACCTGCAAAGGTATCATGCACCTTTGCTCTGTATAGAATGAAATGAAAATTTGTTGATGGTAATTATTAAAGTAGTTTGTTTTGGGTTTAATAATACAGTGTTATGAATTcatctgaatgtttttttttttagttttcagccACCAAAGGGCATGCAACTTTGTTTAAGCTTGACATAAAGACAGAGAAATGTAAAATTATTCACACATGATGTACgaatgtcatgtcatgtcataatAGTTGTTCAGCATTATTTTAGGGAATTGAAAATGAGTTTTATCCCCGGCTCTTAAGTTTAAAAACAGCCAGAACACAATCATTTTGCTGAAAGATTTATACAAGAAAatgactttttgtttgtttgtttgtttgtttatttattcagttaattaaccacacacacatttcctctacaataatgttaaataattgaATTGCCAAATCTTATTAACATGAAAAACAAGTACTGGAATTAAAAGCTTTGTTTGATTCACTA

Function

symbol description
dynlt3 Predicted to enable dynein intermediate chain binding activity. Predicted to be involved in microtubule-based movement. Predicted to be part of cytoplasmic dynein complex. Predicted to be active in cytoplasm and kinetochore. Orthologous to human DYNLT3 (dynein light chain Tctex-type 3).

GO: NA

KEGG: NA

ZFIN:

id description
ZDB-GENE-040927-24 Predicted to enable dynein intermediate chain binding activity. Predicted to be involved in microtubule-based movement. Predicted to be part of cytoplasmic dynein complex. Predicted to be active in cytoplasm and kinetochore. Orthologous to human DYNLT3 (dynein light chain Tctex-type 3).

Ensembl:

ensembl_id ENSDARG00000046132

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006899 True 1148 mRNA 0.38 5 29790626 29794308

Neighbor

gene id symbol gene type direction distance location
XLOC_003527 rpgrb coding upstream 404 29770966 ~ 29790222 (+)
XLOC_003526 gucy1b2 coding upstream 35484 29739348 ~ 29755142 (+)
XLOC_003525 rnf207a coding upstream 112912 29671661 ~ 29677714 (+)
XLOC_003524 NA coding upstream 199430 29590873 ~ 29591196 (+)
XLOC_003523 BX548000.1 coding upstream 219098 29566746 ~ 29571528 (+)
XLOC_003529 grpr coding downstream 61724 29856032 ~ 29877090 (+)
XLOC_003530 NA coding downstream 110940 29905248 ~ 29906829 (+)
XLOC_003531 il1fma coding downstream 171514 29965822 ~ 29972154 (+)
XLOC_003532 si:ch73-226l13.2 coding downstream 181522 29975830 ~ 29981972 (+)
XLOC_003533 nhsb coding downstream 205106 29999414 ~ 30090019 (+)
XLOC_003369 CR854846.2 misc upstream 13667544 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 17078630 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 17096363 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 17105027 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 17110598 12679732 ~ 12680028 (+)
XLOC_003521 CR450796.1 non-coding upstream 438405 29352101 ~ 29352221 (+)
XLOC_003520 NA non-coding upstream 582433 29207886 ~ 29208193 (+)
XLOC_003519 NA non-coding upstream 953927 28797267 ~ 28836699 (+)
XLOC_003534 NA non-coding downstream 296847 30091155 ~ 30103960 (+)
XLOC_003537 NA non-coding downstream 458632 30252940 ~ 30253557 (+)
XLOC_003541 NA non-coding downstream 504395 30298703 ~ 30300054 (+)
XLOC_003550 CR855274.1 non-coding downstream 1180463 30974771 ~ 30974892 (+)

Expression


Co-expression Network