G1594292 (LOC106610101)



Basic Information


Item Value
gene id G1594292
gene name LOC106610101
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 16279290 ~ 16284203 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1825596
CGGAAGTGAACTGACCAAGAACAATTTCCACGTTAGCGTTATTGTTGTAATTTAGACGTTTATTAACACCATGGAACTCAAAATATGACTCATTTAACTGCACTACATCATAAACTTACACCAGGCAGCGTTTAATTCGCGTTGAAGACAGGACTTAGATGTTATCAAGAtaacgctagctagctgctaacaatggctaactgcaTGGTTTTTCAtactcaaatagcctccatcatggaggtactagcgaatgcagccgtggcagacatctgtaaactcgtagacgacgactatgcagtgtttcgtttggaaataactcaaagccagaaagaaaacagggcatTGCGGAGGAAACTACAACTACTGGAACTGAAGATGACACGGGAGCGCGCAGAGAGGACAATTAGAGAGCGCGTCCTCGCCagtcgtcccagtagtgtcaagatTCTCGACCAATACAaaggaatggcaagagGAAATCTCATTGGAGAccacaggagctttgtgaagccagcgggacacaatacatggagagGTGACCAACAaatcactgttgatgaggggaATGGGACCTCAACCCAGCATGTTATcgtgatagagGCTGGAGGTCCTGAAGTCAAGCACGAGCGgactgaagaagaggaggacccaCGGCACAGCAGAGACATCCAGACAGGAGTGCTTGAAGTGCCCCTTGTAGCCACGGAGGACACTACCACTGCCACAGCGCAGGCCAGGACCCAATGCagcatcacggaggtcagtggaacgcCGAACGCCGTCCTCAAGTCAGA

Function


NR:

description
transcription factor Ken-like isoform X1

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1825596 True 794 TUCP 0.49 3 16279290 16284203

Neighbor


gene id symbol gene type direction distance location
LOC110498465 LOC106602409 coding upstream 35549 16033737 ~ 16243741 (+)
LOC110498487 zn271 coding upstream 40901 16219935 ~ 16238389 (+)
LOC110498508 LOC106610084 coding upstream 67404 16095706 ~ 16211886 (+)
LOC110498530 LOC106610072 coding upstream 79676 16196839 ~ 16199614 (+)
LOC118941350 NA coding upstream 98682 16165594 ~ 16180608 (+)
LOC110498495 LOC106610080 coding downstream 3764 16287967 ~ 16299379 (+)
LOC118941341 LOC106610088 coding downstream 112064 16396267 ~ 16400719 (+)
LOC110498500 LOC106602480 coding downstream 117492 16401695 ~ 16406558 (+)
LOC118941345 LOC106602534 coding downstream 531019 16728206 ~ 16818118 (+)
LOC118941347 NA coding downstream 730033 17014236 ~ 17037820 (+)
G1594337 NA non-coding upstream 26676 16251404 ~ 16252614 (+)
G1594635 NA non-coding upstream 73290 16205770 ~ 16206000 (+)
G1594618 NA non-coding upstream 109146 16169733 ~ 16170144 (+)
G1594568 NA non-coding upstream 116939 16059425 ~ 16162351 (+)
G1594544 NA non-coding upstream 292218 15983345 ~ 15987072 (+)
G1594677 NA non-coding downstream 40417 16324620 ~ 16341756 (+)
G1594727 NA non-coding downstream 133123 16417326 ~ 16417888 (+)
G1594731 NA non-coding downstream 137268 16421471 ~ 16421785 (+)
G1594732 NA non-coding downstream 142187 16426390 ~ 16426603 (+)
G1594733 NA non-coding downstream 142853 16427056 ~ 16427430 (+)
G1594334 LOC106609878 other upstream 310746 15964983 ~ 15968544 (+)
G1594340 NA other upstream 462597 15815640 ~ 15816693 (+)
G1594737 LOC106610136 other downstream 150393 16434453 ~ 16436367 (+)
G1594895 NA other downstream 391406 16675609 ~ 16678122 (+)
G1594955 NA other downstream 481340 16765543 ~ 16773709 (+)
pold4 pold4 other downstream 1337215 17621396 ~ 17623478 (+)
G1597295 NA other downstream 1723520 18007723 ~ 18018250 (+)

Expression


G1594292(LOC106610101) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 10.
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G1594292(LOC106610101) Expression in each Bioproject

Bar chart with 21 bars.
G1594292(LOC106610101) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 100.
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Co-expression Network