G1594733


Basic Information

Item Value
gene id G1594733
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 16427056 ~ 16427430 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1826083
gagtaacacctttaacttcttatggctgggggcagtattgagtagcttggatgaataaggtgcccagagtaaactgcctgctactcaggcccagttgctaatatatgcatattattagtagatttggacagaaaacactctgaagtttctaaaactgtttgaatgatgtctgagtataacagaactcatatggcaggcaaaaacctgagaaaaaatccaaccaggaagtgggaaatctgaggtttgtagtttttcaactctttgcctattgAATatgcagtgtctatggggtcatattgcacttcctaaggcttccactagatgtcaacagtatttagaaccttgtttgatgcttctactgtgaaggagggggga

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1826083 True 375 lncRNA 0.41 1 16427056 16427430

Neighbor

gene id symbol gene type direction distance location
LOC110498500 LOC106602480 coding upstream 20498 16401695 ~ 16406558 (+)
LOC118941341 LOC106610088 coding upstream 26337 16396267 ~ 16400719 (+)
LOC110498467 LOC106610080 coding upstream 37854 16250632 ~ 16389202 (+)
LOC110498495 LOC106610080 coding upstream 127677 16287967 ~ 16299379 (+)
LOC110498487 zn271 coding upstream 188667 16219935 ~ 16238389 (+)
LOC118941345 LOC106602534 coding downstream 387792 16728206 ~ 16818118 (+)
LOC118941347 NA coding downstream 586806 17014236 ~ 17037820 (+)
LOC110498663 LOC106609880 coding downstream 615741 17043171 ~ 17083684 (+)
stra6l LOC106609881 coding downstream 687819 17115249 ~ 17139219 (+)
LOC118941458 LOC106602533 coding downstream 718787 17146217 ~ 17151611 (+)
G1594732 NA non-coding upstream 453 16426390 ~ 16426603 (+)
G1594731 NA non-coding upstream 5271 16421471 ~ 16421785 (+)
G1594727 NA non-coding upstream 9168 16417326 ~ 16417888 (+)
G1594677 NA non-coding upstream 85300 16324620 ~ 16341756 (+)
G1594337 NA non-coding upstream 174442 16251404 ~ 16252614 (+)
G1594737 LOC106610136 non-coding downstream 7023 16434453 ~ 16436367 (+)
G1594739 NA non-coding downstream 11013 16438443 ~ 16438828 (+)
G1594742 NA non-coding downstream 16338 16443768 ~ 16444079 (+)
G1594744 NA non-coding downstream 18812 16446242 ~ 16446500 (+)
G1594745 NA non-coding downstream 19189 16446619 ~ 16446840 (+)
G1594292 LOC106610101 other upstream 142853 16279290 ~ 16284203 (+)
LOC110498508 LOC106610084 other upstream 316269 16095706 ~ 16211886 (+)
LOC110498465 LOC106602409 other upstream 387147 16033737 ~ 16243741 (+)
G1594334 LOC106609878 other upstream 458512 15964983 ~ 15968544 (+)
G1594895 NA other downstream 248179 16675609 ~ 16678122 (+)
G1594955 NA other downstream 338113 16765543 ~ 16773709 (+)
pold4 pold4 other downstream 1193988 17621396 ~ 17623478 (+)
G1597295 NA other downstream 1580293 18007723 ~ 18018250 (+)

Expression


Co-expression Network