Gene
RNA
| Item | Value |
|---|---|
| gene id | G1594737 |
| gene name | LOC106610136 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 16434453 ~ 16436367 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110498461 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1826091 | False | 1915 | lncRNA | 0.45 | 1 | 16434453 | 16436367 |
| TU1826092 | False | 1446 | lncRNA | 0.45 | 1 | 16434453 | 16435898 |
| TU1826088 | False | 1303 | lncRNA | 0.47 | 1 | 16434596 | 16435898 |
| TU1826094 | False | 1413 | lncRNA | 0.46 | 1 | 16434596 | 16436008 |
| TU1826096 | False | 1772 | TUCP | 0.46 | 1 | 16434596 | 16436367 |
| TU1826087 | False | 1223 | lncRNA | 0.48 | 1 | 16434676 | 16435898 |
| TU1826089 | False | 1333 | lncRNA | 0.47 | 1 | 16434676 | 16436008 |
| TU1826095 | True | 1692 | lncRNA | 0.47 | 1 | 16434676 | 16436367 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498500 | LOC106602480 | coding | upstream | 27895 | 16401695 ~ 16406558 (+) |
| LOC118941341 | LOC106610088 | coding | upstream | 33734 | 16396267 ~ 16400719 (+) |
| LOC110498467 | LOC106610080 | coding | upstream | 45251 | 16250632 ~ 16389202 (+) |
| LOC110498495 | LOC106610080 | coding | upstream | 135074 | 16287967 ~ 16299379 (+) |
| LOC110498487 | zn271 | coding | upstream | 196064 | 16219935 ~ 16238389 (+) |
| LOC118941345 | LOC106602534 | coding | downstream | 378855 | 16728206 ~ 16818118 (+) |
| LOC118941347 | NA | coding | downstream | 577869 | 17014236 ~ 17037820 (+) |
| LOC110498663 | LOC106609880 | coding | downstream | 606804 | 17043171 ~ 17083684 (+) |
| stra6l | LOC106609881 | coding | downstream | 678882 | 17115249 ~ 17139219 (+) |
| LOC118941458 | LOC106602533 | coding | downstream | 709850 | 17146217 ~ 17151611 (+) |
| G1594733 | NA | non-coding | upstream | 7023 | 16427056 ~ 16427430 (+) |
| G1594732 | NA | non-coding | upstream | 7850 | 16426390 ~ 16426603 (+) |
| G1594731 | NA | non-coding | upstream | 12668 | 16421471 ~ 16421785 (+) |
| G1594727 | NA | non-coding | upstream | 16565 | 16417326 ~ 16417888 (+) |
| G1594677 | NA | non-coding | upstream | 92697 | 16324620 ~ 16341756 (+) |
| G1594739 | NA | non-coding | downstream | 2076 | 16438443 ~ 16438828 (+) |
| G1594742 | NA | non-coding | downstream | 7401 | 16443768 ~ 16444079 (+) |
| G1594744 | NA | non-coding | downstream | 9875 | 16446242 ~ 16446500 (+) |
| G1594745 | NA | non-coding | downstream | 10252 | 16446619 ~ 16446840 (+) |
| G1594749 | NA | non-coding | downstream | 13370 | 16449737 ~ 16449998 (+) |
| G1594292 | LOC106610101 | other | upstream | 150250 | 16279290 ~ 16284203 (+) |
| LOC110498508 | LOC106610084 | other | upstream | 323666 | 16095706 ~ 16211886 (+) |
| LOC110498465 | LOC106602409 | other | upstream | 394544 | 16033737 ~ 16243741 (+) |
| G1594334 | LOC106609878 | other | upstream | 465909 | 15964983 ~ 15968544 (+) |
| G1594895 | NA | other | downstream | 239242 | 16675609 ~ 16678122 (+) |
| G1594955 | NA | other | downstream | 329176 | 16765543 ~ 16773709 (+) |
| pold4 | pold4 | other | downstream | 1185051 | 17621396 ~ 17623478 (+) |
| G1597295 | NA | other | downstream | 1571356 | 18007723 ~ 18018250 (+) |
| G1597342 | LOC106609914 | other | downstream | 1607044 | 18043411 ~ 18104592 (+) |
