G1594895


Basic Information

Item Value
gene id G1594895
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 16675609 ~ 16678122 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1826284
CGCTCCCGTGCCACCTTCAGTTCCAGTagctgtagtttcctccgcagtcctctgttttctttctggctttgagttatttccaaacgaaacactgcatagtcgtcgtctacgagtttacatATATCTGCCACGGCTGTATTTGCTAGCTcctccatgatggaggctatttgagtgtgaaaaaccatatggttagccattgttagcagctagctagcgttaCCTAGATAACATATATCAACCAAGTCTCCCAGCGCGAATTAAAGACGGCCTGAGGAACAAGATGGTCTATCAGCCACAAGTCCTGCTTCATCCCTGcactgagactgtgaagagaagggTCTGGGCTGCAGACTGGATCCCTGACTGGAGTCTCTCTGATGACCACCTGTCCACTGGTTGTGTTCTACGTAGTGGTTGTGGTGGAGTCTCTGTCCCTTGCGGTTGGGTCCTGGTTCCGACTCGGGAAGGAAGAGCGATGGCTCCTGATCCAGGGTTCTGAGACGGGGCCAGGGTTTGTGACCAGCCACCTCAGTGGTCCAGTCTCTCCCACCAGTAACACTGGATATCATCAGGTCTTCAAGGACTGCAGTCTGCAAACAAAGATGGTACAGAAAAGCATAAAGGTTTATATAAGAAACTCTTTACCGTACACAGAAACATGACATTATAAAATGTTAACCAGTCAAGCCCATCTCTAACACTGATTGAAGTACCTAACAATATGGAGCCATTGGATTGATTTTTTATGTTCAAACTCCGTCCCTGCAATGATACAAAAATAACCAAGTCAGTCAGGACAGTGTCAATTTCGTATTTAATTaaaacaaatcacatttattgCACAAAACGATATGTGACAAGTAGAATGACTTTTCTCATCATGGTAACACTGCCTTTTCTGTAAATCTGGTATCCTCCCTTTGATAAAATGAATGTTAAAATACTTTGGAAAATGTTTTACGTTACATTACACACAGCTTCACTACTTCATGTCAAGTAAACATGAATTAAGATACTATCATTatctcggcacagccagaagaggactggccatcccacatatgctctctctaattctctctttctttctctctctcggaggacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttacaattattcgaccatgctggtcatttatgaacatctgaacatcttggccatgttctgttataatttccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctatacagcactttgagatatcagctgatgtacgaagggc
>TU1826285
CGCTCCCGTGCCACCTTCAGTTCCAGTagctgtagtttcctccgcagtcctctgttttctttctggctttgagttatttccaaacgaaacactgcatagtcgtcgtctacgagtttacatATATCTGCCACGGCTGTATTTGCTAGCTcctccatgatggaggctatttgagtgtgaaaaaccatatggttagccattgttagcagctagctagcgttaCCTAGATAACATATATCAACCAAGTCTCCCAGCGCGAATTAAAGACGGCCTGAGGAACAAGATGGTCTATCAGCCACAAGTCCTGCTTCATCCCTGcactgagactgtgaagagaagggTCTGGGCTGCAGACTGGATCCCTGACTGGAGTCTCTCTGATGACCACCTGTCCACTGGTTGTGTTCTACGTAGTGGTTGTGGTGGAGTCTCTGTCCCTTGCGGTTGGGTCCTGGTTCCGACTCGGGAAGGAAGAGCGATGGCTCCTGATCCAGGGTTCTGAGACGGGGCCAGGGTTTGTGACCAGCCACCTCAGTGGTCCAGTCTCTCCCACCAGTAACACTGGATATCATCAGGTCTTCAAGGACTGCAGTCTGCAAACAAAGATGgacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttacaattattcgaccatgctggtcatttatgaacatctgaacatcttggccatgttctgttataatttccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctatacagcactttgagatatcagctgatgtacgaagggc
>TU1826286
CGCTCCCGTGCCACCTTCAGTTCCAGTagctgtagtttcctccgcagtcctctgttttctttctggctttgagttatttccaaacgaaacactgcatagtcgtcgtctacgagtttacatATATCTGCCACGGCTGTATTTGCTAGCTcctccatgatggaggctatttgagtgtgaaaaaccatatggttagccattgttagcagctagctagcgttaCCTAGATAACATATATCAACCAAGTCTCCCAGCGCGAATTAAAGACGGCCTGAGgacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttacaattattcgaccatgctggtcatttatgaacatctgaacatcttggccatgttctgttataatttccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctatacagcactttgagatatcagctgatgtacgaagggc
>TU1826287
CGCTCCCGTGCCACCTTCAGTTCCAGTagctgtagtttcctccgcagtcctctgttttctttctggctttgagttatttccaaacgaaacactgcatagtcgtcgtctacgagtttacatATATCTGCCACGGCTGTATTTGCTAGCTcctccatgatggaggctatttgagtgtgaaaaaccatatggttagccattgttagcagctagctagcgttaCCTAGATAACATATATCAACCAAGTCTCCCAGCGCGAATTAAAGACGGCCTGAGGTAAGTATGTGATGCTGTGCAGTTAAATTAATCATATTTTGAGTTTCAGGGTGTTAATAAACGTCTAGATAACTATAAAAACGCTAACATCGAAATCGTTCTTGGTCCTTGTTCGCTTCCGTTTACTTAAGAGAAAGGATCTTATTGGTGTGCGTCATAGGTTGAATGGTATAATTAGATGAAAAATGTATGCGTGCTATTCTTTGAAATACGGTACTGCTTATTACATTACATCAAATATCCTATGATCAGTATTTTTTTAAGCTGAGAGCTGACGTGTTTATGAAGAGCAGTGTGTTAGCAAGAATAGAGTAGAAAATAGCATGACTTTACCTCAGTAAGGTAAATATTCAATAGTCCTTGTTATAGTCTgaccaactcagtggccttgtggttagtgtctgccctgagattggaaggttgaGTTCAATCCCTGgccgagtcataccaaagactgtaaaaatgggCCCTGATGAGTCTAggcttggcactcagcattaaggagcTAGATTAAGGCTAAGGCCCTGCAATAGACTGCGTcttgtccagggggtgtacttgtacgtcaagctgcctcacactacagaaataGGAGATGAGCTAAGGTTCATGCAAGGCTACTTACTTGTTATAGCCTATGTTTACCATCTCTCTAAAAACAGTTTTTTACAAATGACAAGTTAACAAAGCATTACCCCAATACACTTAACATAACTATAATATAACAGCTAAAGAATGGTTCCCAGATATCCCCTGCGCACATCTCACACTGCTACGATTTCTTCCCGTTGTGGACACTCCTATGTCTATAAGGTTACTTGGGAAGGAGAAGCTCTTGTAACATAGTTTGCACATGAAGGGACTCTCCTTGAGGCAGCTGAGGAAGGTTAGACCCAGGTCCCTTCTATGAACCCTTTCAGTAGGCATTAGACGGGACCCTGAAAGAGAAGACTACCACTAGAGGGGTCTCCCGCCACTCCCTGTGAAGGTTGAATCCCAGGGTGACCTGCTCTGTTCAGcatggatactgtggtgtttgtATCATAGGAACAAGATGGTCTATCAGCCACAAGTCCTGCTTCATCCCTGcactgagactgtgaagagaagggTCTGGGCTGCAGACTGGATCCCTGACTGGAGTCTCTCTGATGACCACCTGTCCACTGGTTGTGTTCTACGTAGTGGTTGTGGTGGAGTCTCTGTCCCTTGCGGTTGGGTCCTGGTTCCGACTCGGGAAGGAAGAGCGATGGCTCCTGATCCAGGGTTCTGAGACGGGGCCAGGGTTTGTGACCAGCCACCTCAGTGGTCCAGTCTCTCCCACCAGTAACACTGGATATCATCAGGTCTTCAAGGACTGCAGTCTGCAAACAAAGATGGTACAGAAAAGCATAAAGgacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttacaattattcgaccatgctggtcatttatgaacatctgaacatcttggccatgttctgttataatttccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctatacagcactttgagatatcagctgatgtacgaagggc
>TU1826288
CGCTCCCGTGCCACCTTCAGTTCCAGTagctgtagtttcctccgcagtcctctgttttctttctggctttgagttatttccaaacgaaacactgcatagtcgtcgtctacgagtttacatATATCTGCCACGGCTGTATTTGCTAGCTcctccatgatggaggctatttgagtgtgaaaaaccatatggttagccattgttagcagctagctagcgttaCCTAGATAACATATATCAACCAAGTCTCCCAGCGCGAATTAAAGACGGCCTGAGGTAAGTATGTGATGCTGTGCAGTTAAATTAATCATATTTTGAGTTTCAGGGTGTTAATAAACGTCTAGATAACTATAAAAACGCTAACATCGAAATCGTTCTTGGTCCTTGTTCGCTTCCGTTTACTTAAGAGAAAGGATCTTATTGGTGTGCGTCATAGGTTGAATGGTATAATTAGATGAAAAATGTATGCGTGCTATTCTTTGAAATACGGTACTGCTTATTACATTACATCAAATATCCTATGATCAGTATTTTTTTAAGCTGAGAGCTGACGTGTTTATGAAGAGCAGTGTGTTAGCAAGAATAGAGTAGAAAATAGCATGACTTTACCTCAGTAAGGTAAATATTCAATAGTCCTTGTTATAGTCTgaccaactcagtggccttgtggttagtgtctgccctgagattggaaggttgaGTTCAATCCCTGgccgagtcataccaaagactgtaaaaatgggCCCTGATGAGTCTAggcttggcactcagcattaaggagcTAGATTAAGGCTAAGGCCCTGCAATAGACTGCGTcttgtccagggggtgtacttgtacgtcaagctgcctcacactacagaaataGGAGATGAGCTAAGGTTCATGCAAGGCTACTTACTTGTTATAGCCTATGTTTACCATCTCTCTAAAAACAGTTTTTTACAAATGACAAGTTAACAAAGCATTACCCCAATACACTTAACATAACTATAATATAACAGCTAAAGAATGGTTCCCAGATATCCCCTGCGCACATCTCACACTGCTACGATTTCTTCCCGTTGTGGACACTCCTATGTCTATAAGGTTACTTGGGAAGGAGAAGCTCTTGTAACATAGTTTGCACATGAAGGGACTCTCCTTGAGGCAGCTGAGGAAGGTTAGACCCAGGTCCCTTCTATGAACCCTTTCAGTAGGCATTAGACGGGACCCTGAAAGAGAAGACTACCACTAGAGGGGTCTCCCGCCACTCCCTGTGAAGGTTGAATCCCAGGGTGACCTGCTCTGTTCAGcatggatactgtggtgtttgtATCATAGGAACAAGATGGTCTATCAGCCACAAGTCCTGCTTCATCCCTGcactgagactgtgaagagaagggTCTGGGCTGCAGACTGGATCCCTGACTGGAGTCTCTCTGATGACCACCTGTCCACTGGTTGTGTTCTACGTAGTGGTTGTGGTGGAGTCTCTGTCCCTTGCGGTTGGGTCCTGGTTCCGACTCGGGAAGGAAGAGCGATGGCTCCTGATCCAGGGTTCTGAGACGGGGCCAGGGTTTGTGACCAGCCACCTCAGTGGTCCAGTCTCTCCCACCAGTAACACTGGATATCATCAGGTCTTCAAGGACTGCAGTCTGCAAACAAAGATGgacctgagccctaggaccatgccccaggaatacctgacatgatgactccttgctgtccccagtccacctgactgtgctgctgctccagtttcaactgttctgccttacaattattcgaccatgctggtcatttatgaacatctgaacatcttggccatgttctgttataatttccacccggcacagccagaagaggactggccaccccacatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccaccgtgcttctacacctgcattgcttgctgtttggggttttaggctgggtttctatacagcactttgagatatcagctgatgtacgaagggc

Function

NR:

description
PREDICTED: zinc finger protein 205-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1826284 False 1467 lncRNA 0.45 2 16675609 16678122
TU1826285 False 971 TUCP 0.50 3 16675609 16678122
TU1826286 False 639 lncRNA 0.48 2 16675609 16678122
TU1826287 False 2036 TUCP 0.46 2 16675609 16678122
TU1826288 True 2018 TUCP 0.46 2 16675609 16678122

Neighbor

gene id symbol gene type direction distance location
LOC110498500 LOC106602480 coding upstream 269051 16401695 ~ 16406558 (+)
LOC118941341 LOC106610088 coding upstream 274890 16396267 ~ 16400719 (+)
LOC110498467 LOC106610080 coding upstream 286407 16250632 ~ 16389202 (+)
LOC110498495 LOC106610080 coding upstream 376230 16287967 ~ 16299379 (+)
LOC110498487 zn271 coding upstream 437220 16219935 ~ 16238389 (+)
LOC118941345 LOC106602534 coding downstream 137100 16728206 ~ 16818118 (+)
LOC118941347 NA coding downstream 336114 17014236 ~ 17037820 (+)
LOC110498663 LOC106609880 coding downstream 365049 17043171 ~ 17083684 (+)
stra6l LOC106609881 coding downstream 437127 17115249 ~ 17139219 (+)
LOC118941458 LOC106602533 coding downstream 468095 17146217 ~ 17151611 (+)
G1594757 NA non-coding upstream 81946 16587795 ~ 16593663 (+)
G1594765 NA non-coding upstream 103998 16567764 ~ 16571611 (+)
G1594789 LOC106602512 non-coding upstream 121576 16475468 ~ 16554033 (+)
G1594763 LOC106610085 non-coding upstream 124355 16549196 ~ 16551254 (+)
G1594749 NA non-coding upstream 225611 16449737 ~ 16449998 (+)
G1594926 LOC106610047 non-coding downstream 41512 16719634 ~ 16721045 (+)
G1594948 NA non-coding downstream 74839 16752961 ~ 16753399 (+)
G1594952 NA non-coding downstream 82616 16760738 ~ 16761133 (+)
G1594983 NA non-coding downstream 141106 16819228 ~ 16819498 (+)
G1594737 LOC106610136 other upstream 239242 16434453 ~ 16436367 (+)
G1594292 LOC106610101 other upstream 391406 16279290 ~ 16284203 (+)
LOC110498508 LOC106610084 other upstream 564822 16095706 ~ 16211886 (+)
LOC110498465 LOC106602409 other upstream 635700 16033737 ~ 16243741 (+)
G1594955 NA other downstream 87421 16765543 ~ 16773709 (+)
pold4 pold4 other downstream 943296 17621396 ~ 17623478 (+)
G1597295 NA other downstream 1329601 18007723 ~ 18018250 (+)
G1597342 LOC106609914 other downstream 1365289 18043411 ~ 18104592 (+)
G1598786 NA other downstream 2354763 19032885 ~ 19033176 (+)

Expression

G1594895 Expression in all Baseline Samples

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G1594895 Expression in each Bioproject

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G1594895 Expression in each Sample
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Co-expression Network