Gene
RNA
| Item | Value |
|---|---|
| gene id | G1596970 |
| gene name | LOC106609899 |
| gene type | misc |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 17494669 ~ 17530745 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC108886169 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1828650 | False | 4072 | TUCP | 0.40 | 3 | 17494669 | 17499443 |
| TU1828651 | False | 2112 | TUCP | 0.41 | 5 | 17494669 | 17499443 |
| TU1828656 | False | 2221 | TUCP | 0.41 | 5 | 17494669 | 17499443 |
| TU1828655 | True | 2311 | lncRNA | 0.41 | 3 | 17521221 | 17530745 |
17,460,000
17,464,000
17,468,000
17,472,000
17,476,000
17,480,000
17,484,000
17,488,000
17,492,000
17,496,000
17,496,000
17,500,000
17,504,000
17,508,000
17,512,000
17,516,000
17,520,000
17,524,000
17,528,000
17,532,000
NC_048583.1
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497439 | LOC105022884 | coding | downstream | 2866 | 17510213 ~ 17518355 (-) |
| LOC118941460 | NA | coding | downstream | 12758 | 17506457 ~ 17508463 (-) |
| LOC110497437 | LOC106602583 | coding | downstream | 14808 | 17494676 ~ 17506413 (-) |
| LOC110497438 | kdm2a | coding | downstream | 26695 | 17475203 ~ 17494526 (-) |
| LOC110497432 | LOC106609894 | coding | downstream | 85010 | 17416966 ~ 17436211 (-) |
| LOC110497442 | LOC106609865 | coding | upstream | 2327 | 17533072 ~ 17537161 (-) |
| LOC110497443 | LOC106609902 | coding | upstream | 17048 | 17547793 ~ 17554950 (-) |
| LOC110498667 | LOC106609920 | coding | upstream | 48696 | 17579441 ~ 17600354 (-) |
| LOC110497445 | LOC106602577 | coding | upstream | 74327 | 17605072 ~ 17613102 (-) |
| LOC110497446 | NA | coding | upstream | 85152 | 17615897 ~ 17623476 (-) |
| G1596964 | NA | non-coding | downstream | 47455 | 17473164 ~ 17473766 (-) |
| G1596939 | NA | non-coding | downstream | 83726 | 17437259 ~ 17437495 (-) |
| G1596913 | NA | non-coding | downstream | 141855 | 17379102 ~ 17379366 (-) |
| G1596990 | NA | non-coding | upstream | 7249 | 17537994 ~ 17538519 (-) |
| G1596992 | NA | non-coding | upstream | 13309 | 17544054 ~ 17544296 (-) |
| G1597068 | NA | non-coding | upstream | 27437 | 17558182 ~ 17558424 (-) |
| G1597077 | NA | non-coding | upstream | 41626 | 17572371 ~ 17572669 (-) |
| G1596970 | LOC106609899 | other | downstream | 21778 | 17494669 ~ 17530745 (-) |
| G1596940 | NA | other | downstream | 83343 | 17437664 ~ 17437878 (-) |
| G1596879 | NA | other | downstream | 233204 | 17286530 ~ 17288017 (-) |
| G1596856 | LOC106613263 | other | downstream | 278198 | 17242606 ~ 17243023 (-) |
| LOC110498506 | LOC106609878 | other | downstream | 589771 | 16924529 ~ 16931521 (-) |
| G1598418 | NA | other | upstream | 1232970 | 18763715 ~ 18764422 (-) |
| G1599097 | LOC106609944 | other | upstream | 1678547 | 19209292 ~ 19209964 (-) |
| G1599197 | NA | other | upstream | 1841564 | 19372309 ~ 19381751 (-) |
| G1599717 | NA | other | upstream | 2024852 | 19555597 ~ 19557357 (-) |
| LOC110497430 | LOC106602587 | coding | downstream | 96501 | 17383975 ~ 17398168 (-) |
| LOC110497429 | LOC106609892 | coding | downstream | 115875 | 17369814 ~ 17378794 (-) |
| LOC110498555 | LOC106609917 | coding | downstream | 128364 | 17359938 ~ 17366305 (-) |
| LOC110497441 | NA | coding | upstream | 23495 | 17522938 ~ 17531665 (-) |
| LOC110498466 | LOC106606466 | other | downstream | 906502 | 16523595 ~ 16588239 (-) |
