G1597392


Basic Information

Item Value
gene id G1597392
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 17748213 ~ 17749753 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1829135
GTACACTTTTATTGCATAAAAAAAAAAGTCAGACGCCCCTAGGGGTTTCATATCAAGcaggaggcacacacacagaatcaATCGACACATTCTGAACGCAACGTTGAGACAGCAGGATTCTACAGTAACCAAGGGAATGTCAAACGGGTCAAATGTTCTGCTACTTCACCTCAATTTACACAATTCTCTCTGCACTGGTGTAAAAATGTGTTTAGTCAACAATTCACAAAATGACaactgggtaaaGCCAGCCCTGAAATGGGAGCTTTTGAAAGTAAAAATGTAATTCTAGCTATTGCCaggacaacaaaaaaacactggTCTAGTTCTCACATGGAATTAGCATTAATAGCCAAACGCTCTCCATCCTCAACTTTCCAATCAGCATCATCTTGAACTGAAAACTATGATTAGGTGACAAAAGAACTCACAAATCACTATTATGGaaggaaaataaacaaaaacacttGCTAATATTTTTTTCTAAATTCCCTCTCAAAGACAGCATTTTGGGACAGAGGCCGTGgttcatatatacacacacccccTACCTTATCATTATGGACCCAGTTGGAGGTAGGTAGATGGCGTGAAATGCTTAGCCAATAGAGTAGACATGCAGCAAAGAGCCTTTGACAGCAATTGGCTAATGAAGGAGACATTTGAGCCAATGCTCAAATGTTGGTCCAATATGAAACATTGCCGGCTCAATGGCACCATatcactacttttgactagtgcACTACAAAAGGGAATCGGTTGCCATTTCCCCCAAAAGCCAAGGTAACTTTGGCCACACCAAGCATGGACTGGACAGAGTGTAAATCCACTCTCATATCCCAAATGGGACAAGTTCTAAATCGAGTGAAACACTATGAACGGAGTGCATCGTTGTAGTGTGCCAAGATTAAGCGTCAAATCAAATGCACTCAAATTGTTTAAGTCATAAAGTACACCCTTCTCCCtatattagtgcactactttgtagtATTGCACTGTATTAGAtaatagaatgccatttgggacgcacccaaTGATGAGCATAGAGGTCCTCCAGGGAACTGGTGGAAAGATCAACATAACTGTCATAGGTGCGATGGAGAGACGTAAAAATCGAACCGTACAGTGTAGATTTAAATGAGTTAATATGGAGTTAATCATCATAATACAATTATTTTGCAACTCAAATCTTGTTGCATACAGTATATAGCAAAACAATAAAAAGGACTCATAACAATCATGTTTGTTCCCTCGATCGAACAGCACACCCCCTCCGTCATCAGCATAACGCCACCTAGTCCCAATGAGACGCCACGCCGTTCTTCAGAGGCCGCTACCCCCGACAATTCTATTTGTCCTTCTTggtctccgtctcctcctcctggGCGTCGACCTCGGGCTCCTCCTCTTCGGGCACGGGCGGGAACTGGGATTCGTTGATCTTGTCGCCCCGGTCTCCCTTGGACTTGTTGAGTTTCTTGGACTTCTGGTAGAGCTCGTTCAGGTTGAACTCCCG

Function

NR:

description
PREDICTED: thioredoxin-related transmembrane protein 2-B

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1829135 True 1516 lncRNA 0.43 2 17748213 17749753
Loading

Neighbor

gene id symbol gene type direction distance location
LOC118941549 NA coding downstream 51671 17696356 ~ 17696542 (-)
LOC110497446 NA coding downstream 126827 17615897 ~ 17623476 (-)
LOC110497445 LOC106602577 coding downstream 135111 17605072 ~ 17613102 (-)
LOC110498667 LOC106609920 coding downstream 147859 17579441 ~ 17600354 (-)
LOC110497443 LOC106609902 coding downstream 193263 17547793 ~ 17554950 (-)
zdhhc5a LOC106609866 coding upstream 471 17750224 ~ 17791565 (-)
LOC110497450 LOC106592462 coding upstream 99089 17848842 ~ 17851818 (-)
LOC110498557 LOC106609922 coding upstream 123882 17873635 ~ 17875393 (-)
LOC110497451 LOC106609911 coding upstream 142888 17892641 ~ 17903484 (-)
LOC110497452 LOC106602564 coding upstream 163170 17912923 ~ 17920708 (-)
G1597388 NA non-coding downstream 10498 17737388 ~ 17737715 (-)
G1597387 NA non-coding downstream 11846 17736163 ~ 17736367 (-)
G1597144 NA non-coding downstream 54420 17693228 ~ 17693793 (-)
G1597137 NA non-coding downstream 61373 17686550 ~ 17686840 (-)
G1597397 NA non-coding upstream 8336 17758089 ~ 17758401 (-)
G1597408 NA non-coding upstream 49218 17798971 ~ 17799202 (-)
G1597426 LOC106609909 non-coding upstream 74478 17824231 ~ 17827073 (-)
G1597450 NA non-coding upstream 108522 17858275 ~ 17869467 (-)
G1596970 LOC106609899 other downstream 248770 17494669 ~ 17530745 (-)
G1596940 NA other downstream 310335 17437664 ~ 17437878 (-)
G1596879 NA other downstream 460196 17286530 ~ 17288017 (-)
G1596856 LOC106613263 other downstream 505190 17242606 ~ 17243023 (-)
G1598418 NA other upstream 1013962 18763715 ~ 18764422 (-)
G1599097 LOC106609944 other upstream 1459539 19209292 ~ 19209964 (-)
G1599197 NA other upstream 1622556 19372309 ~ 19381751 (-)
G1599717 NA other upstream 1805844 19555597 ~ 19557357 (-)
G1599760 LOC106609957 other upstream 1886265 19636018 ~ 19637027 (-)

Expression

G1597392 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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G1597392 Expression in each Bioproject

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G1597392 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 400.
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Co-expression Network