G1597295


Basic Information

Item Value
gene id G1597295
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 18007723 ~ 18018250 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1829025
AAAtgtgagagaaaagagaaaaggcAACCCAAACGGATGGTGGGTGAGAAAATAAGAGTTTATAAAGCAGTGGATCATGTCATCGATTTACAGCTGCATACAAAAGacgtacaaaaaaaaaaaacagcaccaACAGACACGCAGTGCTCTCACATGCCAGGGTAGTGTTCATTAGGGATAGCAACGGGAAACGTTTGCAACAGAACACGAACATTTGCATTTCTTATTTGACATGTCCAGGTAGTCAGCTTTCTTCTGTTTGgtccctaatgaacacgacccagggaAGGGTGAATGAAAAGGGGATGGTGAGAAAAATAAACGAGAACAAAAGCAACCAAAGACAGAAACCAAAAATAAAGTAATTACATATTAAGGTGCTTAAACAATTGTTCTGCGGCCAGTGTCCTTCCTATGTGAATACATACTCATTTACACACGGGAAAAAAAGGCCAAATAAATTCTTAAAATCACATTCATTGAACACAAAAAGTATGCCTAACAAATGTTATTCAAATACATTGTAACAAGCTATTGCATTGACACTAATCGTTTCATTCATTCCGGACAGTAAAAAGGTCGCCGTCAGAATGATCTAGAGAAAAAAAACAACGCCAGGAAGATAACTATATAATTCAAATTACGCCGCTTATCTGATTATATTCATTTAGAGTGAAGTAAAACATACAATTTGGACAAAGGCAATGAATGTGGCGACAACATTAGCTAAGTCATTCCTAATACAGTATTCAACAGCGATCTTAAAGAAAACCTCGTCATAGAATAAAATAACACAATTTCAAAAAGGAGGCTTGTGTTATTGACACCTGAAGGTTTGTTGTATATTGACAAAAGTAAATGTCAGACTTGACTGGGAACAAATGTAGGCTATTGTCTCGTTATCTTAAACATGGCAAGGGGATTTTGCTGTGGTTGAAATGAGCCAAAAGCACACTTTACCTTAGGCCACTTCAACTAGAAGAAAGTACACAAAGTAAGCTGAGAAACTTATGTTGCTCTATCCAAAGTTATATTTATGGACGGAGACATCTAAATGACGTCCTATCAATATTCAATACTTTTCCCACTATAAATATCTTCACATACAAGAAAAGTGGGGAAACGGGTTGCTTTTGCATATGTTTTTCCAACGGTATCAAACTCCTAAAGCCCTATCGACAATCCAATCTAGCTGTCACGTGTAAAATCCGTAGTTTACTCATTCATTTCAAGTGAGAATAAGGATAAATCGCCAAATCCATCGATCAATAAAATCCCaaatctataaatattatttcccATCTAAAGTACAAAATGTACTGTAATTGTTCAAACAGAAGggctaaaaaataaaatatcgACGATTCCACATTTGAAATAACTCGCCCATATAAGAGTTTGCAAACACTATAAAATGAGAAACTGGAATTGACTGTAGGCCCATAGAGGGCAGATATCTAGAGCCTTCCGGTGCAATGCATTTGCCTCCAAACACATCTTACCCTATCCCGTGGTATCCAGCAACACTTTCGGGTATCATGCATCATCATTTTCACTAGAGAAATAGGTGAGTGTTCCTGTGTTGGTGTATTACATTTATGGGGGGGTTCTCTATTGATTTAACACTgaggaaaaaggggaaaaaaacatgtcCAAAACCAAGATGGCTGACATGTTGAAGTCAAGGCAATCCTGAGTGGCAGTTTACTTGGCATCTCTAACTCTATCTTTACCATATTTGACCTTTCTGAATGTTACACAATCAACTTATCAATGCAAGTTATTACATTACTGGGTTAAAATATAtctaataaatcaaataaaagcaGATGTCAACATTTAAAGGTGGCCATCTTGTTTGGCTACCCTTCCTTCAGTATCTGAGGTGAAAGGAATTCAAAAGTATGGATCTTCTTCTACAGCTTCTCGATCCTTTAGAAAATAATTGTTTAATTAGTGGAATAGTCTCCTTTAGAGTTGGCTAGTTAGAGctaaaacaaaatatttttttgtgacgTTGTCGCACATGCTTGAGCAAGGCTTCTTGGATGACCTGTCGTAGTGAGGTCATCCTAGGGTCAGCTCCACCTCCCCCAATCTTAACCTTAAATTAACCATTGGTGGGGAAAGTGCAAAACTGACCAAAATCAGTGTCTGGGGGCAACTTTACTCCGGGTTGGTTGTGTCCAATATGGGTTGTGCTAGAGATGGAAGGGTCCAAGTAAGGAGGGTGCGGGGGTGGACCGGATTCATCATTACAGTTTCTTGACGTAGTTTCCTGGAAAGGTTCCAAACTGCTTGCTCCGTCGGGAAGTCCCGACAAACCAGCCGTCGTCGCACTTCTCCATGACATCCACGATGTCCCCCTCCTTCAGCTCCAGCTCGTCCTCGTTACGGGGCAGATAGTTGTACAGGGCCTGGAACAGGTCTCCTCCACCATGGAGCGAATCCTGCACAAACCtCTTGGCGGGCGTGGAGCCCGGTGTCCTGTTGCTGGGGTAGCCGTGTGGGTCTGGGTGGTGGGAGGGGGCAGGGCTCTTGGATGGCGAGCGTTTGACGATGTCTATGTAGGCCACGGGGAAGATGCCCTGCTTGTTGGTGTCTGGAATCTTCCCCTCGTACCAGTTCTGGTCCACCTGTCTCAGCAAGACTACCCGCTCACCcTTGCGGAGCGACAGTTCCACGTTAGTGTCAGCGTTGAAGTTGTAACGGGCCACCCCCTCCCCGATCTTTTTGACGTGTGCTGGTGGAGGAGGCCTAATCGATCTGTCTGATGATGTTGACCGCGTCGCCCTTCTTGAACGTCAGCTCTCTGAAACAACGGTCGCAAGATGCTTCTTAAACCCCCAAAACAACCGTCTCCATGGGCCGGTCTGGTAAACCGGCAACCAATGACATGTATTGATTATATGTGGCCCACGCAGGAATTAAACCCAAAACCCGGGTGTTGGCAGCCCTGTGTTATAAAGGGAACACGCATTGAGTCATACGGAATCGTCAATGTGACATTGTTAACCAGCCAGGAACTAGTCTCGAGCCCAAAGTCGAGGCGTGTTAAGCCGGAAACATTGTGGGAGGCAAGCTGGATGTCTAAGAGACTAAGCCAAGCACCATTTTAGTATGAAGAGCAATGGCAGCAACACTCGCCCATGCACGCCTTTTCAAAGTAGGGAAATTATTAAAAGATGTGAAGGTAAGCAAGTCACTGCTTTTTAACCTACAATTATTTACCCACTGCACCATACCAGTGTCTATAGTACAGTATGTGAACCAAGCAATTTTGTACGTTGACATAGTaaaaac
>TU1829026
AAAtgtgagagaaaagagaaaaggcAACCCAAACGGATGGTGGGTGAGAAAATAAGAGTTTATAAAGCAGTGGATCATGTCATCGATTTACAGCTGCATACAAAAGacgtacaaaaaaaaaaaacagcaccaACAGACACGCAGTGCTCTCACATGCCAGGGTAGTGTTCATTAGGGATAGCAACGGGAAACGTTTGCAACAGAACACGAACATTTGCATTTCTTATTTGACATGTCCAGGTAGTCAGCTTTCTTCTGTTTGgtccctaatgaacacgacccagggaAGGGTGAATGAAAAGGGGATGGTGAGAAAAATAAACGAGAACAAAAGCAACCAAAGACAGAAACCAAAAATAAAGTAATTACATATTAAGGTGCTTAAACAATTGTTCTGCGGCCAGTGTCCTTCCTATGTGAATACATACTCATTTACACACGGGAAAAAAAGGCCAAATAAATTCTTAAAATCACATTCATTGAACACAAAAAGTATGCCTAACAAATGTTATTCAAATACATTGTAACAAGCTATTGCATTGACACTAATCGTTTCATTCATTCCGGACAGTAAAAAGGTCGCCGTCAGAATGATCTAGAGAAAAAAAACAACGCCAGGAAGATAACTATATAATTCAAATTACGCCGCTTATCTGATTATATTCATTTAGAGTGAAGTAAAACATACAATTTGGACAAAGGCAATGAATGTGGCGACAACATTAGCTAAGTCATTCCTAATACAGTATTCAACAGCGATCTTAAAGAAAACCTCGTCATAGAATAAAATAACACAATTTCAAAAAGGAGGCTTGTGTTATTGACACCTGAAGGTTTGTTGTATATTGACAAAAGTAAATGTCAGACTTGACTGGGAACAAATGTAGGCTATTGTCTCGTTATCTTAAACATGGCAAGGGGATTTTGCTGTGGTTGAAATGAGCCAAAAGCACACTTTACCTTAGGCCACTTCAACTAGAAGAAAGTACACAAAGTAAGCTGAGAAACTTATGTTGCTCTATCCAAAGTTATATTTATGGACGGAGACATCTAAATGACGTCCTATCAATATTCAATACTTTTCCCACTATAAATATCTTCACATACAAGAAAAGTGGGGAAACGGGTTGCTTTTGCATATGTTTTTCCAACGGTATCAAACTCCTAAAGCCCTATCGACAATCCAATCTAGCTGTCACGTGTAAAATCCGTAGTTTACTCATTCATTTCAAGTGAGAATAAGGATAAATCGCCAAATCCATCGATCAATAAAATCCCaaatctataaatattatttcccATCTAAAGTACAAAATGTACTGTAATTGTTCAAACAGAAGggctaaaaaataaaatatcgACGATTCCACATTTGAAATAACTCGCCCATATAAGAGTTTGCAAACACTATAAAATGAGAAACTGGAATTGACTGTAGGCCCATAGAGGGCAGATATCTAGAGCCTTCCGGTGCAATGCATTTGCCTCCAAACACATCTTACCCTATCCCGTGGTATCCAGCAACACTTTCGGGTATCATGCATCATCATTTTCACTAGAGAAATAGGTGAGTGTTCCTGTGTTGGTGTATTACATTTATGGGGGGGTTCTCTATTGATTTAACACTgaggaaaaaggggaaaaaaacatgtcCAAAACCAAGATGGCTGACATGTTGAAGTCAAGGCAATCCTGAGTGGCAGTTTACTTGGCATCTCTAACTCTATCTTTACCATATTTGACCTTTCTGAATGTTACACAATCAACTTATCAATGCAAGTTATTACATTACTGGGTTAAAATATAtctaataaatcaaataaaagcaGATGTCAACATTTAAAGGTGGCCATCTTGTTTGGCTACCCTTCCTTCAGTATCTGAGGTGAAAGGAATTCAAAAGTATGGATCTTCTTCTACAGCTTCTCGATCCTTTAGAAAATAATTGTTTAATTAGTGGAATAGTCTCCTTTAGAGTTGGCTAGTTAGAGctaaaacaaaatatttttttgtgacgTTGTCGCACATGCTTGAGCAAGGCTTCTTGGATGACCTGTCGTAGTGAGGTCATCCTAGGGTCAGCTCCACCTCCCCCAATCTTAACCTTAAATTAACCATTGGTGGGGAAAGTGCAAAACTGACCAAAATCAGTGTCTGGGGGCAACTTTACTCCGGGTTGGTTGTGTCCAATATGGGTTGTGCTAGAGATGGAAGGGTCCAAGTAAGGAGGGTGCGGGGGTGGACCGGATTCATCATTACAGTTTCTTGACGTAGTTTCCTGGAAAGGTTCCAAACTGCTTGCTCCGTCGGGAAGTCCCGACAAACCAGCCGTCGTCGCACTTCTCCATGACATCCACGATGTCCCCCTCCTTCAGCTCCAGCTCGTCCTCGTTACGGGGCAGATAGTTGTACAGGGCCTGGAACAGGTCTCCTCCACCATGGAGCGAATCCTGCACAAACCtCTTGGCGGGCGTGGAGCCCGGTGTCCTGTTGCTGGGGTAGCCGTGTGGGTCTGGGTGGTGGGAGGGGGCAGGGCTCTTGGATGGCGAGCGTTTGACGATGTCTATGTAGGCCACGGGGAAGATGCCCTGCTTGTTGGTGTCTGGAATCTTCCCCTCGTACCAGTTCTGGTCCACCTGTCTCAGCAAGACTACCCGCTCACCCTGCAGATTGTATACGCAGGTGAACACACATGGACAGACGCACAGATATATGTGCATATCAACGCAGGCAAATATGGGAATTTAAGACACTTCAGTGAACAGATATGCACATTGAACCATGCACAAATCACACCAACACgcacaaatttg

Function

NR:

description
PREDICTED: sorbin and SH3 domain-containing protein 2-like

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1829025 False 3303 lncRNA 0.42 6 18007723 18018250
TU1829026 True 2813 TUCP 0.41 4 18007723 18017040
Loading

Neighbor

gene id symbol gene type direction distance location
LOC110498558 LOC106609924 coding upstream 45602 17956507 ~ 17962121 (+)
LOC110497454 LOC106609867 coding upstream 66178 17937002 ~ 17941545 (+)
LOC110497453 lrat coding upstream 71389 17934316 ~ 17936334 (+)
LOC110497449 LOC106609909 coding upstream 163963 17806915 ~ 17843760 (+)
LOC110497448 LOC106609908 coding upstream 257957 17740434 ~ 17749766 (+)
LOC110497458 LOC100135888 coding downstream 142847 18161097 ~ 18218659 (+)
LOC118941462 NA coding downstream 784477 18802727 ~ 18815594 (+)
LOC118941552 NA coding downstream 820302 18838552 ~ 18838607 (+)
LOC110497463 LOC106609940 coding downstream 1105459 19123709 ~ 19141362 (+)
LOC110497461 LOC106609942 coding downstream 1124920 19143170 ~ 19147993 (+)
G1597334 NA non-coding upstream 1266 18006252 ~ 18006457 (+)
G1597261 LOC106602564 non-coding upstream 14800 17912787 ~ 17992923 (+)
G1597307 NA non-coding upstream 41547 17964930 ~ 17966176 (+)
G1597277 NA non-coding upstream 99792 17907417 ~ 17907931 (+)
G1597263 LOC106609911 non-coding upstream 108796 17893485 ~ 17898927 (+)
G1597336 NA non-coding downstream 7280 18025530 ~ 18032904 (+)
G1597341 LOC106572245 non-coding downstream 20102 18038352 ~ 18043336 (+)
G1597364 NA non-coding downstream 86530 18104780 ~ 18105037 (+)
G1597602 NA non-coding downstream 87361 18105611 ~ 18105944 (+)
G1597626 NA non-coding downstream 115144 18133394 ~ 18133718 (+)
pold4 pold4 other upstream 384250 17621396 ~ 17623478 (+)
G1594955 NA other upstream 1234014 16765543 ~ 16773709 (+)
G1594895 NA other upstream 1329601 16675609 ~ 16678122 (+)
G1594737 LOC106610136 other upstream 1571356 16434453 ~ 16436367 (+)
G1594292 LOC106610101 other upstream 1723520 16279290 ~ 16284203 (+)
G1597342 LOC106609914 other downstream 25161 18043411 ~ 18104592 (+)
G1598786 NA other downstream 1014635 19032885 ~ 19033176 (+)
LOC110497472 LOC106609985 other downstream 1308178 19326377 ~ 19328349 (+)
G1598960 NA other downstream 1313491 19331741 ~ 19332220 (+)
G1598961 LOC107681197 other downstream 1314770 19333020 ~ 19333450 (+)

Expression

G1597295 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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G1597295 Expression in each Bioproject

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G1597295 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 500.
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Co-expression Network