Gene
RNA
| Item | Value |
|---|---|
| gene id | G1597602 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 18105611 ~ 18105944 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1829374 | True | 334 | lncRNA | 0.44 | 1 | 18105611 | 18105944 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498558 | LOC106609924 | coding | upstream | 143490 | 17956507 ~ 17962121 (+) |
| LOC110497454 | LOC106609867 | coding | upstream | 164066 | 17937002 ~ 17941545 (+) |
| LOC110497453 | lrat | coding | upstream | 169277 | 17934316 ~ 17936334 (+) |
| LOC110497449 | LOC106609909 | coding | upstream | 261851 | 17806915 ~ 17843760 (+) |
| LOC110497448 | LOC106609908 | coding | upstream | 355845 | 17740434 ~ 17749766 (+) |
| LOC110497458 | LOC100135888 | coding | downstream | 55153 | 18161097 ~ 18218659 (+) |
| LOC118941462 | NA | coding | downstream | 696783 | 18802727 ~ 18815594 (+) |
| LOC118941552 | NA | coding | downstream | 732608 | 18838552 ~ 18838607 (+) |
| LOC110497463 | LOC106609940 | coding | downstream | 1017765 | 19123709 ~ 19141362 (+) |
| LOC110497461 | LOC106609942 | coding | downstream | 1037226 | 19143170 ~ 19147993 (+) |
| G1597364 | NA | non-coding | upstream | 574 | 18104780 ~ 18105037 (+) |
| G1597341 | LOC106572245 | non-coding | upstream | 62275 | 18038352 ~ 18043336 (+) |
| G1597336 | NA | non-coding | upstream | 72707 | 18025530 ~ 18032904 (+) |
| G1597295 | NA | non-coding | upstream | 87361 | 18007723 ~ 18018250 (+) |
| G1597334 | NA | non-coding | upstream | 99154 | 18006252 ~ 18006457 (+) |
| G1597626 | NA | non-coding | downstream | 27450 | 18133394 ~ 18133718 (+) |
| G1597628 | NA | non-coding | downstream | 29232 | 18135176 ~ 18135395 (+) |
| G1597634 | NA | non-coding | downstream | 33143 | 18139087 ~ 18139354 (+) |
| G1597649 | NA | non-coding | downstream | 48524 | 18154468 ~ 18154721 (+) |
| G1597734 | NA | non-coding | downstream | 125042 | 18230986 ~ 18231193 (+) |
| G1597342 | LOC106609914 | other | upstream | 1019 | 18043411 ~ 18104592 (+) |
| pold4 | pold4 | other | upstream | 482138 | 17621396 ~ 17623478 (+) |
| G1594955 | NA | other | upstream | 1331902 | 16765543 ~ 16773709 (+) |
| G1594895 | NA | other | upstream | 1427489 | 16675609 ~ 16678122 (+) |
| G1598786 | NA | other | downstream | 926941 | 19032885 ~ 19033176 (+) |
| LOC110497472 | LOC106609985 | other | downstream | 1220484 | 19326377 ~ 19328349 (+) |
| G1598960 | NA | other | downstream | 1225797 | 19331741 ~ 19332220 (+) |
| G1598961 | LOC107681197 | other | downstream | 1227076 | 19333020 ~ 19333450 (+) |
| G1599186 | NA | other | downstream | 1286347 | 19392291 ~ 19418517 (+) |
