G1598084


Basic Information

Item Value
gene id G1598084
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 18402217 ~ 18408359 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1829882
agttaatactttgtagcgccaccttttgctgcgattacagctgtaagtcgcttggggtatgtctctatcaattttgcacatcgagagactgaaattttttcccattactccttgcaaaatagctcgagctcagtgaggttggatggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctgaatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacaaatctccgtcccagtctccatcaggttttcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccaccatgtttgacagtggggatggtgtgttcagctgtgttgcttttacgccaaacataacgttttgcattgttgccagaaagttcaattttggtttcatctgaccagagcaccttcttccacatgtttggtgtgtctcccaggtggcttgtggcaaactttaaacgacactttttatggataactttaagaaatggctttcttcttgccactcttccataaaggccagatttgtgcaatatacgactgattgttgtcctatggacagagtctcccacctcagctgtagatctctgcagttcatccagagtgatcttgggcctcttggctgcatctctgatcagtcttctccttgtatgagctgaaagtttagagggacggccaggtcttggtagatttgcagtggtctgatactccttccatttcaatattatcgcttgcacagtgctccttgggatgtttaaagcttgggaaatctttttgtatccaaatccggctttaaacttcttcacaacagtatctcggacctgcctggtgtgttccttgttcttcatgatgctctctgcgcttttaacggacctctgagactatcacagtgcaggtgcatttatacggagacttgattacacacaggtggattgtatttatcatcattcgtcatttaggtcaacattggatcattcagagatcctcactgaacttctggagagagtttgctgcactgaaagtaaaggggctgaataattttgcacgcccaatttttcagtttttgatttgttaaaaaagtttgaaatatccaataaatgtcgttccacttcatgattgtgtcccacttgttgttgattcttcaccaaaaaatacagttttatatctttatgtttgaagcctgaaatgtggcaaaaggtcataaag

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1829882 True 1354 lncRNA 0.42 2 18402217 18408359

Neighbor

gene id symbol gene type direction distance location
LOC118941355 NA coding downstream 252498 18146158 ~ 18149719 (-)
LOC110497456 LOC106609914 coding downstream 307688 18007657 ~ 18094529 (-)
LOC110497455 pdli3 coding downstream 396467 17980056 ~ 18005750 (-)
LOC110498559 LOC106602637 coding downstream 425496 17971731 ~ 17976721 (-)
LOC110497452 LOC106602564 coding downstream 481509 17912923 ~ 17920708 (-)
LOC110497459 LOC106609939 coding upstream 67037 18475396 ~ 18579393 (-)
LOC110497460 LOC106609941 coding upstream 740043 19148402 ~ 19184184 (-)
LOC110497466 LOC106609946 coding upstream 810775 19219134 ~ 19228766 (-)
LOC110497469 LOC106609949 coding upstream 845013 19253372 ~ 19270658 (-)
LOC110497471 LOC106609951 coding upstream 895172 19303531 ~ 19310735 (-)
G1597842 NA non-coding downstream 87004 18314998 ~ 18315213 (-)
G1597833 NA non-coding downstream 94460 18307520 ~ 18307757 (-)
G1597650 NA non-coding downstream 247496 18154491 ~ 18154721 (-)
G1597647 NA non-coding downstream 248978 18152773 ~ 18153239 (-)
G1597639 NA non-coding downstream 257253 18144647 ~ 18144964 (-)
G1598114 NA non-coding upstream 47600 18455959 ~ 18456664 (-)
G1598115 NA non-coding upstream 50024 18458383 ~ 18458602 (-)
G1598128 NA non-coding upstream 84032 18492391 ~ 18493564 (-)
G1598137 NA non-coding upstream 112440 18520799 ~ 18542735 (-)
G1598173 NA non-coding upstream 174441 18582800 ~ 18583117 (-)
LOC110497446 NA other downstream 778741 17615897 ~ 17623476 (-)
G1596970 LOC106609899 other downstream 902774 17494669 ~ 17530745 (-)
G1596940 NA other downstream 964339 17437664 ~ 17437878 (-)
G1596879 NA other downstream 1114200 17286530 ~ 17288017 (-)
G1596856 LOC106613263 other downstream 1159194 17242606 ~ 17243023 (-)
G1598418 NA other upstream 355356 18763715 ~ 18764422 (-)
G1599097 LOC106609944 other upstream 800933 19209292 ~ 19209964 (-)
G1599197 NA other upstream 963950 19372309 ~ 19381751 (-)
G1599717 NA other upstream 1147238 19555597 ~ 19557357 (-)
G1599760 LOC106609957 other upstream 1227659 19636018 ~ 19637027 (-)

Expression


Co-expression Network