G1599216


Basic Information

Item Value
gene id G1599216
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 19435735 ~ 19441084 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1831103
cagagaggctcccacaacaaccacagcggctcccacaacaaccacagcagcTTCGACTACAACCACattggctcccacaacaaccagagaggctcccacaacaaccacagcggctcccacaacaaccacagcgactcccacaacaaccactgcgactcccactacaaccacagcttacctcacaacacccacagcggctcccacaacaaccacagcgactcccacaacaaccacagcgtctcccacaacaaccccatctgcttccacaacaaccacagctgatgttataacaacgacatcagctccaaaaacaaccacagcgactcccacaacaaccacagcgactcccacaacatCCACTGAGGCTCCCACTACAAcgacagcggctcccactacaaccacagcggctcccactacaaccacagcggctcccactacaaccacagttgATGTTATAACAACGGCATCAGCTCCCACTACGACCACAGcatctcccactacaaccactgcggctcccactacgaccacagcatctcccactacaaccactgcggctcccactacaaccacagcggctcccactacaaaaacagcggctcccacaacaaccacagcggctcccactacgaccacagcgactcccacaacaaccacagctgatgttataacaacgacatcagctcccacaacaaccacagcgactcccacaacaaccacagcgactcccacaacatccactgcggctcccactacaaccacagcggcttcGACTACAATCACattggctcccacaacaaccacagaggctcccacaacaaccactgcgactcccactacaaccacagcttacctcacaacacccacagcggctcccacaacaaccacagcgactcccacaacaaccacagcgtctcccacaacaaccccatctgcttccacaacaaccacagctgatgttataacaacgacatcagctcccacaacaaccccatctgcttccacaacaaccacagctgatgttataacaacgacatcagctcccacaacaaccacagcgactcccacaacaaccacagcgactcccacaacatccactgcggctcccactacaaccacagcggctcccactacaacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1831103 True 1135 lncRNA 0.55 2 19435735 19441084

Neighbor

gene id symbol gene type direction distance location
LOC118941546 NA coding downstream 15268 19397768 ~ 19420467 (-)
LOC118941463 NA coding downstream 58579 19374805 ~ 19377156 (-)
LOC110497474 NA coding downstream 67088 19364691 ~ 19368647 (-)
LOC110497471 LOC106609951 coding downstream 125000 19303531 ~ 19310735 (-)
LOC110497469 LOC106609949 coding downstream 165077 19253372 ~ 19270658 (-)
LOC110497535 LOC106602669 coding upstream 76178 19517262 ~ 19524270 (-)
LOC110498562 NA coding upstream 84022 19525106 ~ 19535210 (-)
LOC110497533 LOC106609955 coding upstream 153269 19594353 ~ 19598996 (-)
LOC118941464 NA coding upstream 153269 19594353 ~ 19609921 (-)
LOC110498685 LOC106602680 coding upstream 227175 19668259 ~ 19669604 (-)
G1599206 NA non-coding downstream 43149 19391951 ~ 19392586 (-)
G1599172 NA non-coding downstream 77306 19355580 ~ 19358429 (-)
G1599167 NA non-coding downstream 87112 19348150 ~ 19348623 (-)
G1599154 NA non-coding downstream 103425 19331769 ~ 19332310 (-)
G1599133 LOC106609985 non-coding downstream 107385 19326326 ~ 19328350 (-)
G1599220 NA non-coding upstream 387 19441471 ~ 19441676 (-)
G1599703 NA non-coding upstream 97039 19538123 ~ 19538351 (-)
G1599705 NA non-coding upstream 97952 19539036 ~ 19539283 (-)
G1599735 NA non-coding upstream 142828 19583912 ~ 19584259 (-)
G1599749 NA non-coding upstream 175134 19616218 ~ 19616426 (-)
G1599197 NA other downstream 53984 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 225771 19209292 ~ 19209964 (-)
G1598418 NA other downstream 671313 18763715 ~ 18764422 (-)
LOC110497446 NA other downstream 1812259 17615897 ~ 17623476 (-)
G1596970 LOC106609899 other downstream 1936292 17494669 ~ 17530745 (-)
G1599717 NA other upstream 114513 19555597 ~ 19557357 (-)
G1599760 LOC106609957 other upstream 194934 19636018 ~ 19637027 (-)
G1599758 LOC106609957 other upstream 197676 19638760 ~ 19642003 (-)
G1600014 LOC106609977 other upstream 666831 20107915 ~ 20108791 (-)
G1600030 NA other upstream 686127 20127211 ~ 20136561 (-)

Expression


Co-expression Network