G1599750


Basic Information

Item Value
gene id G1599750
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 19619391 ~ 19622039 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1831704
TCCTTTCTGCATATCTCAAAGTCATACATTAATAATAAATATGGTTTCTATATCTTCCCACACCACACCAGAGTTAATATGAAACACAACAAAAGAAaatcagcaacaggaaatgttagTACATTAGTTTGGATTGTGTTAACAAAGTATCCATCAGTCCTATGTCTAACTACTttatataccagggttggctggccttctctagtcactcgtaggctcagtcactggtaaaCTTTAATTTACAAAGTCATTTTGGGTTTAGTAGCATTTTATTTGTGcttttttattgttcagaaatgtggtgagcactctcttcgttcgctggactttatcctgctaactgttccaaatttCTGAACTGAGTTTGGAAAAAAGGGCTTTTCTGTACTCTGCGCCATGGTCTTGGAACGCCttaaaaaaatactttcaaactggaagaacttgtcccaatTGGTGTTTGTAAATCATCGCTGAAGGATTTTGAGGcggattccctgacctgtcaatgtttttaattcgctgttttataattttgttatactcttgtgaattctatgttgTTTTACTAGATTacctgtagtttttcatgttgtctgtctgtaattgtgtaatgacttggtgctgcctatcttggccaggacactcttgaaaaagagatttcaaatctcaatgagcccttcctggttaaataaaggttaaatacatttttttttaaaacgacTGTCTCTCAATCTCATCAATGTGCCTAACCAAAGAATACAGGGTTAGATCTGTTTGCATCCTCCTACTGGTTAAAATTAGGATTGGGGATAAGgtcatctgatcctagatctgtggttaggggcaACTGGCACTATACCAAGAGGTCATGGAAAAGGGCTAGTTGCTCCAGCAACCGTGTGTACTCAACTCAGCGTAAAAATGGAGGAGACTTTGCTACAGTGCATCTCAGTCTACAAAGGTACTAAAAACAATCCAGTCTGGCAATTTCAATTTTCCTTCAAAGTCACATACACAAGAATAGGGATGGCCATCCCTCCGCTTGGAGAGCTATTGtctgcaggcttttgctccaacCCTGCACGAACACACCTAATTCTACTGATCAGCTGCTCAATCCGCTCTAATTTGAATTGCGAACATGGTTTAACAACATCACACCTCCCAGCCCTACCAATTTGACGGCTACGCAATGATATTAAAAGGGTCTGTTTCAACGGGGGTCATATAGTAATGATtgggtttaaaatatatatatatatatttgtgtgtgtgtgtgtgtgtgtacagtaccagtcataagtttggacacacctactcattcaagggttccataacacatatggaatcatgtagcaaccaaaaaatgtttaacaaatctaaatatattttatattcttcaaagtagccaccctttgcctagacgccagctttgcacacttttggcattctcccaaccagcttcacctggactgcttttccaacagtcttgaaggagttcccacatatgctgagcacttgttggctgcttttccttcactctgcggtctaactcatctcaaaccatctcatttgggttgaggtcgggtgattgtggaggccaggtcatctgatgcagcactccatccctctccttcttggtcaaatagcccttacacagcctgaaggtgtgttgggtcattgtcctgttgaaaaaccaatgatagtcccactaagcgcaaaccagatgggatggtggatcgctgcagaatgctgtggtagccatgctggttaagtgtgcctttaattctaaacaaatcactgagtgtcagcagcaaagcacccccactccatcacaccttctcctccatgcttcacggtggaaaccacacatacggagattatccgttcacctactctgcatctcacaaagaaccaaaaatctcaaatttggactcaggacagatttccacttgtctaatgtccattgctcatgtttcttggcctaagcaagtatcttcttattattggtgtccttttagtagtgttttctttgcaaaaatttgaccatgaaggcctgaatcacgcagtctcctctgaacagttgatgttgagatgtgtctgctacttgaattctgtgaagcatttatttgggctgcaatctgagaactctgatgaactcatcctctgcagtagaggtaactctgggtcttcctttcctgtggcggttctcatgagagcccatttcatcatagcgcttgatggtttttgcaactgcacttgaagaaactttcaaagttcttaacattttccacattgactgacattcatgtcttaaagtaatgatggactgtcatttctctttgtttatttgagctgttcttgccataatatggacctggtcttttaccaaatagggctatcttctgtataccagccctaccttgtcacaacacaactgattggctcaaaagcattaagaaggaaagaaattccacaaattaacttttaacaaggcacacctgttaattgatacgcattccaggtgactacctcatgaagctggttgagagaatgccaagagtgtgcaaagctgtcatcaaagcaaagggtggctactttgaagaatctcaaatataaactatattttgacttgtgtaacactttttt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1831704 True 2649 lncRNA 0.41 1 19619391 19622039

Neighbor

gene id symbol gene type direction distance location
LOC118941464 NA coding downstream 9470 19594353 ~ 19609921 (-)
LOC110497533 LOC106609955 coding downstream 20395 19594353 ~ 19598996 (-)
LOC110498562 NA coding downstream 84181 19525106 ~ 19535210 (-)
LOC110497535 LOC106602669 coding downstream 95121 19517262 ~ 19524270 (-)
LOC118941546 NA coding downstream 198924 19397768 ~ 19420467 (-)
LOC110498685 LOC106602680 coding upstream 46220 19668259 ~ 19669604 (-)
LOC110497529 LOC100136072 coding upstream 109409 19666386 ~ 19751340 (-)
LOC110497528 LOC106609961 coding upstream 115868 19737907 ~ 19741020 (-)
doc2d LOC106609963 coding upstream 129770 19751809 ~ 19804307 (-)
LOC110498680 LOC106609964 coding upstream 219347 19841386 ~ 19866037 (-)
G1599749 NA non-coding downstream 2965 19616218 ~ 19616426 (-)
G1599735 NA non-coding downstream 35132 19583912 ~ 19584259 (-)
G1599705 NA non-coding downstream 80108 19539036 ~ 19539283 (-)
G1599703 NA non-coding downstream 81040 19538123 ~ 19538351 (-)
G1599220 NA non-coding downstream 177715 19441471 ~ 19441676 (-)
G1599752 NA non-coding upstream 4838 19626877 ~ 19627573 (-)
G1599753 NA non-coding upstream 6687 19628726 ~ 19629011 (-)
G1599755 NA non-coding upstream 10763 19632802 ~ 19633536 (-)
G1599756 NA non-coding upstream 11499 19633538 ~ 19633754 (-)
G1599757 NA non-coding upstream 12461 19634500 ~ 19634983 (-)
G1599717 NA other downstream 62034 19555597 ~ 19557357 (-)
G1599197 NA other downstream 237640 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 409427 19209292 ~ 19209964 (-)
G1598418 NA other downstream 854969 18763715 ~ 18764422 (-)
LOC110497446 NA other downstream 1995915 17615897 ~ 17623476 (-)
G1599760 LOC106609957 other upstream 13979 19636018 ~ 19637027 (-)
G1599758 LOC106609957 other upstream 16721 19638760 ~ 19642003 (-)
G1600014 LOC106609977 other upstream 485876 20107915 ~ 20108791 (-)
G1600030 NA other upstream 505172 20127211 ~ 20136561 (-)
G1602753 NA other upstream 2781477 22403516 ~ 22403837 (-)

Expression


Co-expression Network