G1599990



Basic Information


Item Value
gene id G1599990
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 20055457 ~ 20055662 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1831984
AAGCTAAGCTATGCACTTGCTCACATCAAAAGATGACAGACCTTAAACTCAAAAGAGAGGCATTGGATTACCTGATAACAGAGGGGCAATGGGCCTAATCCTCGAAACATTTGATATTTTTGTTGTACACttcatgaccaaaggtatgtggacacctgctcgtcggacatctcattccaaaatcatgggcattaatatggatttgg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1831984 True 206 lncRNA 0.41 1 20055457 20055662

Neighbor


gene id symbol gene type direction distance location
trnak-uuu-127 NA coding downstream 60791 19994594 ~ 19994666 (-)
LOC110498680 LOC106609964 coding downstream 189420 19841386 ~ 19866037 (-)
doc2d LOC106609963 coding downstream 251150 19751809 ~ 19804307 (-)
LOC110497528 LOC106609961 coding downstream 314437 19737907 ~ 19741020 (-)
LOC110497529 LOC100136072 coding downstream 318784 19666386 ~ 19751340 (-)
LOC110497518 LOC106609978 coding upstream 147688 20203350 ~ 20274981 (-)
adra1b adra1b coding upstream 364394 20420056 ~ 20440924 (-)
LOC110497516 LOC106609982 coding upstream 1068365 21124027 ~ 21128524 (-)
LOC110497514 LOC106610028 coding upstream 1707504 21763166 ~ 21790562 (-)
LOC110497512 LOC106610027 coding upstream 1743593 21799255 ~ 21820806 (-)
G1599988 NA non-coding downstream 4972 20050173 ~ 20050485 (-)
G1599985 NA non-coding downstream 8655 20046125 ~ 20046802 (-)
G1599986 LOC106609973 non-coding downstream 10164 20043374 ~ 20045293 (-)
G1599983 NA non-coding downstream 13074 20042162 ~ 20042383 (-)
G1599982 NA non-coding downstream 13514 20041731 ~ 20041943 (-)
G1599995 NA non-coding upstream 11552 20067214 ~ 20067595 (-)
G1600016 LOC106609977 non-coding upstream 55141 20110803 ~ 20111086 (-)
G1600018 NA non-coding upstream 59295 20114957 ~ 20115198 (-)
G1600041 NA non-coding upstream 104844 20160506 ~ 20163140 (-)
G1600043 NA non-coding upstream 111022 20166684 ~ 20168077 (-)
G1599758 LOC106609957 other downstream 413454 19638760 ~ 19642003 (-)
G1599760 LOC106609957 other downstream 418430 19636018 ~ 19637027 (-)
G1599717 NA other downstream 498100 19555597 ~ 19557357 (-)
G1599197 NA other downstream 673706 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 845493 19209292 ~ 19209964 (-)
G1600014 LOC106609977 other upstream 52253 20107915 ~ 20108791 (-)
G1600030 NA other upstream 71549 20127211 ~ 20136561 (-)
G1602753 NA other upstream 2347854 22403516 ~ 22403837 (-)
G1602763 NA other upstream 2359756 22415418 ~ 22416043 (-)
LOC110497482 LOC106610017 other upstream 3086154 23121508 ~ 23168994 (-)

Expression



Co-expression Network