G1599995



Basic Information


Item Value
gene id G1599995
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 20067214 ~ 20067595 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1831989
gattgctcagtttggccgggcggccagctctaggaagagtcttggtggttccaaacttcttccatttaagaatgtgtgttcttggggaccactgtgttcttggggaccttcaatgctgcaaaaatgttttcgtacccttccccagatctgtgccttgacacaatcctgtctcggagctctatggacaattccttcgacctcatggcttggtttttgctctgacatccactgtcaactgtgggaccttatgtagacaggtgtgtgcctttccaaatcatttccaatcaattaaatttaccacaggtggactccaataaagttgtagaaacatctcaaggatgatcaatggaaacaggatgcacctgagctcaatttcgagtct

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1831989 True 382 lncRNA 0.46 1 20067214 20067595

Neighbor


gene id symbol gene type direction distance location
trnak-uuu-127 NA coding downstream 72548 19994594 ~ 19994666 (-)
LOC110498680 LOC106609964 coding downstream 201177 19841386 ~ 19866037 (-)
doc2d LOC106609963 coding downstream 262907 19751809 ~ 19804307 (-)
LOC110497528 LOC106609961 coding downstream 326194 19737907 ~ 19741020 (-)
LOC110497529 LOC100136072 coding downstream 330541 19666386 ~ 19751340 (-)
LOC110497518 LOC106609978 coding upstream 135755 20203350 ~ 20274981 (-)
adra1b adra1b coding upstream 352461 20420056 ~ 20440924 (-)
LOC110497516 LOC106609982 coding upstream 1056432 21124027 ~ 21128524 (-)
LOC110497514 LOC106610028 coding upstream 1695571 21763166 ~ 21790562 (-)
LOC110497512 LOC106610027 coding upstream 1731660 21799255 ~ 21820806 (-)
G1599990 NA non-coding downstream 11552 20055457 ~ 20055662 (-)
G1599988 NA non-coding downstream 16729 20050173 ~ 20050485 (-)
G1599985 NA non-coding downstream 20412 20046125 ~ 20046802 (-)
G1599986 LOC106609973 non-coding downstream 21921 20043374 ~ 20045293 (-)
G1599983 NA non-coding downstream 24831 20042162 ~ 20042383 (-)
G1600016 LOC106609977 non-coding upstream 43208 20110803 ~ 20111086 (-)
G1600018 NA non-coding upstream 47362 20114957 ~ 20115198 (-)
G1600041 NA non-coding upstream 92911 20160506 ~ 20163140 (-)
G1600043 NA non-coding upstream 99089 20166684 ~ 20168077 (-)
G1599758 LOC106609957 other downstream 425211 19638760 ~ 19642003 (-)
G1599760 LOC106609957 other downstream 430187 19636018 ~ 19637027 (-)
G1599717 NA other downstream 509857 19555597 ~ 19557357 (-)
G1599197 NA other downstream 685463 19372309 ~ 19381751 (-)
G1599097 LOC106609944 other downstream 857250 19209292 ~ 19209964 (-)
G1600014 LOC106609977 other upstream 40320 20107915 ~ 20108791 (-)
G1600030 NA other upstream 59616 20127211 ~ 20136561 (-)
G1602753 NA other upstream 2335921 22403516 ~ 22403837 (-)
G1602763 NA other upstream 2347823 22415418 ~ 22416043 (-)
LOC110497482 LOC106610017 other upstream 3074221 23121508 ~ 23168994 (-)

Expression



Co-expression Network