Gene
RNA
| Item | Value |
|---|---|
| gene id | G1601446 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 21392398 ~ 21392635 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1833508 | True | 238 | lncRNA | 0.41 | 1 | 21392398 | 21392635 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497517 | ctnna2 | coding | upstream | 60454 | 20668895 ~ 21333923 (+) |
| LOC110498561 | LOC103369849 | coding | upstream | 988998 | 20400331 ~ 20403400 (+) |
| LOC110498677 | LOC106609979 | coding | upstream | 1029618 | 20335232 ~ 20362780 (+) |
| LOC110498678 | LOC106609977 | coding | upstream | 1198891 | 20079713 ~ 20193507 (+) |
| LOC110497519 | LOC106609975 | coding | upstream | 1332337 | 20055332 ~ 20060061 (+) |
| LOC110497513 | cisd2 | coding | downstream | 400409 | 21793044 ~ 21797937 (+) |
| LOC110497510 | LOC106610025 | coding | downstream | 600408 | 21993043 ~ 21996218 (+) |
| LOC110497507 | NA | coding | downstream | 698856 | 22091491 ~ 22095427 (+) |
| LOC110497505 | dnja1 | coding | downstream | 799691 | 22192326 ~ 22215865 (+) |
| LOC110497504 | LOC106602713 | coding | downstream | 836781 | 22229416 ~ 22265522 (+) |
| G1601439 | NA | non-coding | upstream | 4105 | 21388051 ~ 21388293 (+) |
| G1601425 | NA | non-coding | upstream | 19432 | 21372760 ~ 21372966 (+) |
| G1601404 | NA | non-coding | upstream | 31724 | 21360139 ~ 21360674 (+) |
| G1601392 | NA | non-coding | upstream | 43215 | 21348983 ~ 21349183 (+) |
| G1601381 | NA | non-coding | upstream | 57111 | 21335006 ~ 21335287 (+) |
| G1601464 | NA | non-coding | downstream | 15937 | 21408572 ~ 21408855 (+) |
| G1601484 | NA | non-coding | downstream | 37218 | 21429853 ~ 21430106 (+) |
| G1601526 | NA | non-coding | downstream | 100663 | 21493298 ~ 21497998 (+) |
| G1601531 | NA | non-coding | downstream | 112089 | 21504724 ~ 21505044 (+) |
| G1601532 | NA | non-coding | downstream | 112692 | 21505327 ~ 21505528 (+) |
| G1600522 | NA | other | upstream | 749882 | 20642082 ~ 20642516 (+) |
| G1600174 | adra1b | other | upstream | 971743 | 20418646 ~ 20420655 (+) |
| G1600167 | NA | other | upstream | 981087 | 20411033 ~ 20411311 (+) |
| G1600166 | NA | other | upstream | 981499 | 20410673 ~ 20410899 (+) |
| LOC110497521 | LOC106602766 | other | upstream | 1345636 | 20039547 ~ 20046898 (+) |
| G1601848 | LOC106610028 | other | downstream | 370531 | 21763166 ~ 21784919 (+) |
| G1601872 | LOC106610027 | other | downstream | 410558 | 21803193 ~ 21803890 (+) |
| G1602007 | LOC106610024 | other | downstream | 626432 | 22019067 ~ 22020999 (+) |
| G1602216 | NA | other | downstream | 1024567 | 22417202 ~ 22417549 (+) |
| LOC110497498 | LOC106610000 | other | downstream | 1056182 | 22423424 ~ 22462109 (+) |
