G1601464


Basic Information

Item Value
gene id G1601464
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 21408572 ~ 21408855 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1833526
aaacagtaccagagcTACCTTTTTCTCTTCCTGCACGATTTCACATTTGATATAATTTCACAAACCATGTCCCGGGCTGTTTTAAACTAATCCCGGGTCGCAAATGATTGGTTTGATAACAAACAAtgttgttcagtcatgttacctagctagctaacaatctgCCCACTTGACAGTAGGTCTAGGCAGATTTGATTGGCACAGGGAGAAAGGAAAAGGGTCTGCTACTCACGAGATCTGCTTCAAAAGGTAGGAATCATATAGGGCTAGTGTAAGCCCAAACT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1833526 True 284 lncRNA 0.42 1 21408572 21408855

Neighbor

gene id symbol gene type direction distance location
LOC110497517 ctnna2 coding upstream 76628 20668895 ~ 21333923 (+)
LOC110498561 LOC103369849 coding upstream 1005172 20400331 ~ 20403400 (+)
LOC110498677 LOC106609979 coding upstream 1045792 20335232 ~ 20362780 (+)
LOC110498678 LOC106609977 coding upstream 1215065 20079713 ~ 20193507 (+)
LOC110497519 LOC106609975 coding upstream 1348511 20055332 ~ 20060061 (+)
LOC110497513 cisd2 coding downstream 384189 21793044 ~ 21797937 (+)
LOC110497510 LOC106610025 coding downstream 584188 21993043 ~ 21996218 (+)
LOC110497507 NA coding downstream 682636 22091491 ~ 22095427 (+)
LOC110497505 dnja1 coding downstream 783471 22192326 ~ 22215865 (+)
LOC110497504 LOC106602713 coding downstream 820561 22229416 ~ 22265522 (+)
G1601446 NA non-coding upstream 15937 21392398 ~ 21392635 (+)
G1601439 NA non-coding upstream 20279 21388051 ~ 21388293 (+)
G1601425 NA non-coding upstream 35606 21372760 ~ 21372966 (+)
G1601404 NA non-coding upstream 47898 21360139 ~ 21360674 (+)
G1601392 NA non-coding upstream 59389 21348983 ~ 21349183 (+)
G1601484 NA non-coding downstream 20998 21429853 ~ 21430106 (+)
G1601526 NA non-coding downstream 84443 21493298 ~ 21497998 (+)
G1601531 NA non-coding downstream 95869 21504724 ~ 21505044 (+)
G1601532 NA non-coding downstream 96472 21505327 ~ 21505528 (+)
G1601543 NA non-coding downstream 118198 21527053 ~ 21527281 (+)
G1600522 NA other upstream 766056 20642082 ~ 20642516 (+)
G1600174 adra1b other upstream 987917 20418646 ~ 20420655 (+)
G1600167 NA other upstream 997261 20411033 ~ 20411311 (+)
G1600166 NA other upstream 997673 20410673 ~ 20410899 (+)
LOC110497521 LOC106602766 other upstream 1361810 20039547 ~ 20046898 (+)
G1601848 LOC106610028 other downstream 354311 21763166 ~ 21784919 (+)
G1601872 LOC106610027 other downstream 394338 21803193 ~ 21803890 (+)
G1602007 LOC106610024 other downstream 610212 22019067 ~ 22020999 (+)
G1602216 NA other downstream 1008347 22417202 ~ 22417549 (+)
LOC110497498 LOC106610000 other downstream 1039962 22423424 ~ 22462109 (+)

Expression


Co-expression Network