G1601531


Basic Information

Item Value
gene id G1601531
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 21504724 ~ 21505044 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1833595
agtagcctagtggttagagcgttggactagtaaccggaaggttgtgagttcaaacccccgagctgacaaggtacaaatctgtcgttctgcccctgaacaggcagttaacccactgttcccaggccgtcattgaaaataagaatttgttcttaactgacttgcctggttaaataaaggtaaaataaataaataaaaaaaaagaattaatggggccatgtatcgtgagattttgagtgaaaacctccttccatcagcaagggcattgaagatgaaacgtggctgggtcgttcagcatgacaatgatcccaaacacaccgcccg

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1833595 True 321 lncRNA 0.44 1 21504724 21505044

Neighbor

gene id symbol gene type direction distance location
LOC110497517 ctnna2 coding upstream 172780 20668895 ~ 21333923 (+)
LOC110498561 LOC103369849 coding upstream 1101324 20400331 ~ 20403400 (+)
LOC110498677 LOC106609979 coding upstream 1141944 20335232 ~ 20362780 (+)
LOC110498678 LOC106609977 coding upstream 1311217 20079713 ~ 20193507 (+)
LOC110497519 LOC106609975 coding upstream 1444663 20055332 ~ 20060061 (+)
LOC110497513 cisd2 coding downstream 288000 21793044 ~ 21797937 (+)
LOC110497510 LOC106610025 coding downstream 487999 21993043 ~ 21996218 (+)
LOC110497507 NA coding downstream 586447 22091491 ~ 22095427 (+)
LOC110497505 dnja1 coding downstream 687282 22192326 ~ 22215865 (+)
LOC110497504 LOC106602713 coding downstream 724372 22229416 ~ 22265522 (+)
G1601526 NA non-coding upstream 6726 21493298 ~ 21497998 (+)
G1601484 NA non-coding upstream 74618 21429853 ~ 21430106 (+)
G1601464 NA non-coding upstream 95869 21408572 ~ 21408855 (+)
G1601446 NA non-coding upstream 112089 21392398 ~ 21392635 (+)
G1601439 NA non-coding upstream 116431 21388051 ~ 21388293 (+)
G1601532 NA non-coding downstream 283 21505327 ~ 21505528 (+)
G1601543 NA non-coding downstream 22009 21527053 ~ 21527281 (+)
G1601547 NA non-coding downstream 28970 21534014 ~ 21534218 (+)
G1601848 LOC106610028 non-coding downstream 258122 21763166 ~ 21784919 (+)
G1601864 NA non-coding downstream 271837 21776881 ~ 21777210 (+)
G1600522 NA other upstream 862208 20642082 ~ 20642516 (+)
G1600174 adra1b other upstream 1084069 20418646 ~ 20420655 (+)
G1600167 NA other upstream 1093413 20411033 ~ 20411311 (+)
G1600166 NA other upstream 1093825 20410673 ~ 20410899 (+)
LOC110497521 LOC106602766 other upstream 1457962 20039547 ~ 20046898 (+)
G1601872 LOC106610027 other downstream 298149 21803193 ~ 21803890 (+)
G1602007 LOC106610024 other downstream 514023 22019067 ~ 22020999 (+)
G1602216 NA other downstream 912158 22417202 ~ 22417549 (+)
LOC110497498 LOC106610000 other downstream 943773 22423424 ~ 22462109 (+)

Expression


Co-expression Network