G1601947


Basic Information

Item Value
gene id G1601947
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 21923081 ~ 21923289 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1834036
gtacatattacctcaatgtacaggtaccccctgtatatagcctcgctactgttattttactgctgctctttaactatttATTTGCATGTTTTACTTAACACGTATTTttcttgaaactgcattgttggttaagtaagcatttcactgtaaggtctactacatctgttttATTCGGCacatatgacaaatacaatttgatgctcccagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1834036 True 209 lncRNA 0.35 1 21923081 21923289

Neighbor

gene id symbol gene type direction distance location
LOC110497513 cisd2 coding upstream 125144 21793044 ~ 21797937 (+)
LOC110497517 ctnna2 coding upstream 591137 20668895 ~ 21333923 (+)
LOC110498561 LOC103369849 coding upstream 1519681 20400331 ~ 20403400 (+)
LOC110498677 LOC106609979 coding upstream 1560301 20335232 ~ 20362780 (+)
LOC110498678 LOC106609977 coding upstream 1729574 20079713 ~ 20193507 (+)
LOC110497510 LOC106610025 coding downstream 69754 21993043 ~ 21996218 (+)
LOC110497507 NA coding downstream 168202 22091491 ~ 22095427 (+)
LOC110497505 dnja1 coding downstream 269037 22192326 ~ 22215865 (+)
LOC110497504 LOC106602713 coding downstream 306127 22229416 ~ 22265522 (+)
LOC110497503 LOC106609996 coding downstream 365953 22289242 ~ 22326408 (+)
G1601937 NA non-coding upstream 13240 21909523 ~ 21909841 (+)
G1601930 NA non-coding upstream 24283 21898597 ~ 21898798 (+)
G1601928 NA non-coding upstream 29783 21891946 ~ 21893298 (+)
G1601918 NA non-coding upstream 49956 21872910 ~ 21873125 (+)
G1601869 NA non-coding upstream 104386 21789814 ~ 21818695 (+)
G1601954 NA non-coding downstream 9028 21932317 ~ 21932525 (+)
G1601956 tacr3 non-coding downstream 10669 21933958 ~ 21934422 (+)
G1601957 NA non-coding downstream 12704 21935993 ~ 21936198 (+)
G1601959 NA non-coding downstream 17702 21940991 ~ 21941231 (+)
G1601946 NA non-coding downstream 81258 22004547 ~ 22005049 (+)
G1601872 LOC106610027 other upstream 119191 21803193 ~ 21803890 (+)
G1601848 LOC106610028 other upstream 146329 21763166 ~ 21784919 (+)
G1600522 NA other upstream 1280565 20642082 ~ 20642516 (+)
G1600174 adra1b other upstream 1502426 20418646 ~ 20420655 (+)
G1600167 NA other upstream 1511770 20411033 ~ 20411311 (+)
G1602007 LOC106610024 other downstream 95778 22019067 ~ 22020999 (+)
G1602216 NA other downstream 493913 22417202 ~ 22417549 (+)
LOC110497498 LOC106610000 other downstream 525528 22423424 ~ 22462109 (+)
G1605451 sptlc2 other downstream 2927886 24851175 ~ 24853937 (+)
G1606716 NA other downstream 3901195 25824484 ~ 25824826 (+)

Expression


Co-expression Network