Gene
RNA
| Item | Value |
|---|---|
| gene id | G1602504 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 21931783 ~ 21931984 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1834643 | True | 202 | lncRNA | 0.53 | 1 | 21931783 | 21931984 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497512 | LOC106610027 | coding | downstream | 110977 | 21799255 ~ 21820806 (-) |
| LOC110497514 | LOC106610028 | coding | downstream | 141221 | 21763166 ~ 21790562 (-) |
| LOC110497516 | LOC106609982 | coding | downstream | 803259 | 21124027 ~ 21128524 (-) |
| adra1b | adra1b | coding | downstream | 1490859 | 20420056 ~ 20440924 (-) |
| LOC110497518 | LOC106609978 | coding | downstream | 1656802 | 20203350 ~ 20274981 (-) |
| LOC110498676 | NA | coding | upstream | 67264 | 21999248 ~ 22001354 (-) |
| LOC110497508 | LOC106610024 | coding | upstream | 76339 | 22008323 ~ 22121011 (-) |
| LOC110497506 | mnd1 | coding | upstream | 191440 | 22122397 ~ 22169711 (-) |
| LOC110498675 | LOC106610021 | coding | upstream | 223896 | 22155880 ~ 22186787 (-) |
| LOC100135859 | LOC106602804 | coding | upstream | 289864 | 22221848 ~ 22225274 (-) |
| G1602497 | NA | non-coding | downstream | 7060 | 21924429 ~ 21924723 (-) |
| G1602490 | NA | non-coding | downstream | 17107 | 21914457 ~ 21914676 (-) |
| LOC110497511 | tacr3 | non-coding | downstream | 35565 | 21894972 ~ 21934646 (-) |
| G1602481 | NA | non-coding | downstream | 38420 | 21892040 ~ 21893363 (-) |
| G1602475 | NA | non-coding | downstream | 52318 | 21875098 ~ 21879465 (-) |
| G1602556 | NA | non-coding | upstream | 72570 | 22004554 ~ 22005007 (-) |
| G1602559 | NA | non-coding | upstream | 75309 | 22007293 ~ 22007646 (-) |
| G1602655 | NA | non-coding | upstream | 259942 | 22191926 ~ 22192138 (-) |
| G1602626 | NA | non-coding | upstream | 278568 | 22210552 ~ 22215865 (-) |
| G1600030 | NA | other | downstream | 1795222 | 20127211 ~ 20136561 (-) |
| G1600014 | LOC106609977 | other | downstream | 1822992 | 20107915 ~ 20108791 (-) |
| G1599758 | LOC106609957 | other | downstream | 2289780 | 19638760 ~ 19642003 (-) |
| G1599760 | LOC106609957 | other | downstream | 2294756 | 19636018 ~ 19637027 (-) |
| G1599717 | NA | other | downstream | 2374426 | 19555597 ~ 19557357 (-) |
| G1602753 | NA | other | upstream | 471532 | 22403516 ~ 22403837 (-) |
| G1602763 | NA | other | upstream | 483434 | 22415418 ~ 22416043 (-) |
| LOC110497482 | LOC106610017 | other | upstream | 1209832 | 23121508 ~ 23168994 (-) |
| G1604902 | NA | other | upstream | 2041806 | 23973790 ~ 23974106 (-) |
| gpr137c | LOC106602981 | other | upstream | 2258714 | 24176332 ~ 24206622 (-) |
