G1601959


Basic Information

Item Value
gene id G1601959
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 21940991 ~ 21941231 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1834048
aactgggccatttttagcttccaggaattgtgtacagatccttgcaacatgcattatcatgctgaaacatgagatgatggcggtggatgaatggcatgacttaggcctcaggatctcgtcacggttactttgtgcattcaaatgaccatagataaaatgcaattgtgtttgttgtccgcagcttatgcctgctcataccataacaacaccgccaccatggggcacaacgttgacatcacgt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1834048 True 241 lncRNA 0.45 1 21940991 21941231

Neighbor

gene id symbol gene type direction distance location
LOC110497513 cisd2 coding upstream 143054 21793044 ~ 21797937 (+)
LOC110497517 ctnna2 coding upstream 609047 20668895 ~ 21333923 (+)
LOC110498561 LOC103369849 coding upstream 1537591 20400331 ~ 20403400 (+)
LOC110498677 LOC106609979 coding upstream 1578211 20335232 ~ 20362780 (+)
LOC110498678 LOC106609977 coding upstream 1747484 20079713 ~ 20193507 (+)
LOC110497510 LOC106610025 coding downstream 51812 21993043 ~ 21996218 (+)
LOC110497507 NA coding downstream 150260 22091491 ~ 22095427 (+)
LOC110497505 dnja1 coding downstream 251095 22192326 ~ 22215865 (+)
LOC110497504 LOC106602713 coding downstream 288185 22229416 ~ 22265522 (+)
LOC110497503 LOC106609996 coding downstream 348011 22289242 ~ 22326408 (+)
G1601957 NA non-coding upstream 4793 21935993 ~ 21936198 (+)
G1601956 tacr3 non-coding upstream 6569 21933958 ~ 21934422 (+)
G1601954 NA non-coding upstream 8466 21932317 ~ 21932525 (+)
G1601947 NA non-coding upstream 17702 21923081 ~ 21923289 (+)
G1601937 NA non-coding upstream 31150 21909523 ~ 21909841 (+)
G1601946 NA non-coding downstream 63316 22004547 ~ 22005049 (+)
G1602037 yo84 non-coding downstream 124706 22065937 ~ 22068096 (+)
G1602108 NA non-coding downstream 226400 22167631 ~ 22170667 (+)
G1602082 NA non-coding downstream 275884 22217115 ~ 22217868 (+)
G1602078 NA non-coding downstream 280420 22221651 ~ 22225312 (+)
G1601872 LOC106610027 other upstream 137101 21803193 ~ 21803890 (+)
G1601848 LOC106610028 other upstream 164239 21763166 ~ 21784919 (+)
G1600522 NA other upstream 1298475 20642082 ~ 20642516 (+)
G1600174 adra1b other upstream 1520336 20418646 ~ 20420655 (+)
G1600167 NA other upstream 1529680 20411033 ~ 20411311 (+)
G1602007 LOC106610024 other downstream 77836 22019067 ~ 22020999 (+)
G1602216 NA other downstream 475971 22417202 ~ 22417549 (+)
LOC110497498 LOC106610000 other downstream 507586 22423424 ~ 22462109 (+)
G1605451 sptlc2 other downstream 2909944 24851175 ~ 24853937 (+)
G1606716 NA other downstream 3883253 25824484 ~ 25824826 (+)

Expression


Co-expression Network