G1601946


Basic Information

Item Value
gene id G1601946
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 22004547 ~ 22005049 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1834035
tgctgccaacacactgacactgactcaactccagccactttaataatgggaattgatgggaaatgatgtaaatatatcactagccactttaaacaatgctacctaatataatgtttacataccctacattattcatctcatatgtatacgtatatactgtactctatatcatctactgcatctttatgtaatacatgtatcactagccactttaactatgccactttgtttacatactcatctcatttgtacatactgtacccgataccatctactgtatcttgcctatgctgctctgtaccatcactcattcatatatccttatgtacatattctttatccccttacactgtgtacaagacagtagtttcggaattgttagttagattacttgttggttattactgcattgtcggaactagaagcacaagcatttcgctacactcgcattaacatctgctaaccatgtgtatgtgacaaataaaatttgatttgatttgatt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1834035 True 503 lncRNA 0.35 1 22004547 22005049

Neighbor

gene id symbol gene type direction distance location
LOC110497510 LOC106610025 coding upstream 8329 21993043 ~ 21996218 (+)
LOC110497513 cisd2 coding upstream 206610 21793044 ~ 21797937 (+)
LOC110497517 ctnna2 coding upstream 672603 20668895 ~ 21333923 (+)
LOC110498561 LOC103369849 coding upstream 1601147 20400331 ~ 20403400 (+)
LOC110498677 LOC106609979 coding upstream 1641767 20335232 ~ 20362780 (+)
LOC110497507 NA coding downstream 86442 22091491 ~ 22095427 (+)
LOC110497505 dnja1 coding downstream 187277 22192326 ~ 22215865 (+)
LOC110497504 LOC106602713 coding downstream 224367 22229416 ~ 22265522 (+)
LOC110497503 LOC106609996 coding downstream 284193 22289242 ~ 22326408 (+)
LOC110497502 LOC106609999 coding downstream 360743 22365792 ~ 22381737 (+)
G1601959 NA non-coding upstream 63316 21940991 ~ 21941231 (+)
G1601957 NA non-coding upstream 68349 21935993 ~ 21936198 (+)
G1601956 tacr3 non-coding upstream 70125 21933958 ~ 21934422 (+)
G1601954 NA non-coding upstream 72022 21932317 ~ 21932525 (+)
G1601947 NA non-coding upstream 81258 21923081 ~ 21923289 (+)
G1602037 yo84 non-coding downstream 60888 22065937 ~ 22068096 (+)
G1602108 NA non-coding downstream 162582 22167631 ~ 22170667 (+)
G1602082 NA non-coding downstream 212066 22217115 ~ 22217868 (+)
G1602078 NA non-coding downstream 216602 22221651 ~ 22225312 (+)
G1602133 NA non-coding downstream 222440 22227489 ~ 22228947 (+)
G1601872 LOC106610027 other upstream 200657 21803193 ~ 21803890 (+)
G1601848 LOC106610028 other upstream 227795 21763166 ~ 21784919 (+)
G1600522 NA other upstream 1362031 20642082 ~ 20642516 (+)
G1600174 adra1b other upstream 1583892 20418646 ~ 20420655 (+)
G1600167 NA other upstream 1593236 20411033 ~ 20411311 (+)
G1602007 LOC106610024 other downstream 14018 22019067 ~ 22020999 (+)
G1602216 NA other downstream 412153 22417202 ~ 22417549 (+)
LOC110497498 LOC106610000 other downstream 443768 22423424 ~ 22462109 (+)
G1605451 sptlc2 other downstream 2846126 24851175 ~ 24853937 (+)
G1606716 NA other downstream 3819435 25824484 ~ 25824826 (+)

Expression


Co-expression Network