G1602700


Basic Information

Item Value
gene id G1602700
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 22289381 ~ 22293391 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1834892
TGTAAGACCTGTTATGAGTTTGAATGGGCCCCTTAATAATGTCTTACAATAGAAACAAACCAACATCCACAGCTCTTACCTTTCCGTTTTTCAGGTGCACCATGAACGGCCTTTCCAGTGCTGCCAGCTTATTCTCTCCGAGAAGGCTTTGCGTTGTGGCGCCCTGGAATATGTTCTTCTTGGCTGAGCGTTGGGCCACACTTTTTATCTTCACGTTTGAGATACCAGTCGGATGAGCTGGTCGTCCTTGCTGTTGGGGTCTCTCCACACTAAGTTGACATCCACGTCACTGGAGATCCTATAGCCAACACTGCCATCCTTTGACCCCTTGGCCCTGTCCACCAGCACCTCGGTGGTGTAGCTGAATTTGTACAACTGGTCATTGTTCAGCCTGGGTCCAGCAGCACCAGCACCTCTAATGGTCATGACGATCAATCGGATGAGAAGAGGACGATAGCCTTATCAACAGCGCATGCACAAGTGCGAATTGACATCGAGGTTTCGTCCTCAAGTAGTAGCCTATCATGATAAAAATCAGTGAGACAATTACATATAGGATAAAACAGTAACGTTAGTTTCACAGCTGTAGCGATACTGCCGAATTCTGCCCAACTTTCAGCAACAAGTTCAAAACAATAAAATACTCTTAACATTTTCAACGTACGACTAAAAGGTTGAAAACAATGGTGACATTTACCCC

Function

NR:

description
microsomal triglyceride transfer protein-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1834892 True 700 lncRNA 0.46 3 22289381 22293391

Neighbor

gene id symbol gene type direction distance location
LOC100135859 LOC106602804 coding downstream 64107 22221848 ~ 22225274 (-)
LOC110498675 LOC106610021 coding downstream 102594 22155880 ~ 22186787 (-)
LOC110497506 mnd1 coding downstream 133559 22122397 ~ 22169711 (-)
LOC110497508 LOC106610024 coding downstream 168370 22008323 ~ 22121011 (-)
LOC110498676 NA coding downstream 288027 21999248 ~ 22001354 (-)
LOC110497500 LOC106609998 coding upstream 37686 22331077 ~ 22358393 (-)
LOC110497496 LOC106602722 coding upstream 194321 22487712 ~ 22497823 (-)
LOC110497495 LOC106610003 coding upstream 228601 22521992 ~ 22587011 (-)
LOC110497491 LOC106610007 coding upstream 394925 22688316 ~ 22694024 (-)
LOC118941547 LOC106610007 coding upstream 412785 22706176 ~ 22721341 (-)
G1602693 NA non-coding downstream 9777 22279262 ~ 22279604 (-)
G1602687 NA non-coding downstream 22558 22266402 ~ 22266823 (-)
G1602671 LOC105030945 non-coding downstream 41870 22243632 ~ 22247511 (-)
G1602656 NA non-coding downstream 70542 22218231 ~ 22218839 (-)
G1602626 NA non-coding downstream 73516 22210552 ~ 22215865 (-)
G1602714 NA non-coding upstream 28972 22322363 ~ 22324915 (-)
G1602718 NA non-coding upstream 47308 22340699 ~ 22402816 (-)
G1602732 LOC106602719 non-coding upstream 72432 22365823 ~ 22367574 (-)
G1602754 NA non-coding upstream 110491 22403882 ~ 22404083 (-)
G1602757 NA non-coding upstream 114673 22408064 ~ 22408293 (-)
G1600030 NA other downstream 2152820 20127211 ~ 20136561 (-)
G1600014 LOC106609977 other downstream 2180590 20107915 ~ 20108791 (-)
G1599758 LOC106609957 other downstream 2647378 19638760 ~ 19642003 (-)
G1599760 LOC106609957 other downstream 2652354 19636018 ~ 19637027 (-)
G1599717 NA other downstream 2732024 19555597 ~ 19557357 (-)
G1602753 NA other upstream 110125 22403516 ~ 22403837 (-)
G1602763 NA other upstream 122027 22415418 ~ 22416043 (-)
LOC110497482 LOC106610017 other upstream 848425 23121508 ~ 23168994 (-)
G1604902 NA other upstream 1680399 23973790 ~ 23974106 (-)
gpr137c LOC106602981 other upstream 1897307 24176332 ~ 24206622 (-)

Expression


Co-expression Network