G1602714


Basic Information

Item Value
gene id G1602714
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 22322363 ~ 22324915 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1834916
TGAAGGGGAAGGTGGTCTTGTCCATCTGCATGCACACCAGGAAGGGGTACTCCGAGAACTGGACCGTGGTGATAAAGTCTAGAGACGCCTCTGTCTCAAAGCTCACTTCCATCCCAGTGCGCACAAAGTCCATGTCCACGGTCACATTCCCGGTCACCACCATGGCTCCCCTGCAAATAGACACAATTACAGATGACAAATAAAAATGGGTAGATGAGAATAATTTGTGTTTTTTCTCAAATAAAGATTCATTTGCATTTGGCTAGCCTTTGACTAGTAAAATGCCTTTTAACTCAACAGACAATTAACAGGTGGTGACTGGTGGTGGACACAGAGGTGTGACAAAAATCTCTTACAAACTTGAGAATGTCTGAATATGAAACTGCTATCGTCATATTTCTCTGCTTGAAATCTCAAAATGGCCACTGCCAAGCCATCTGAAaaacctgtatgtctgtctgtggaaGCATGCCTTTGGCCTAGATGTCACATGGGTTTGTTCTGCTCACTTGGGTTTGTTCTGCTCCTATAGATAGCCTGCTGGTCTATTATCAGAGGAGAGGATCCATACACCTGCCTCTGCCATTCCCCTTGTTGACTTTGAGCCAACACAGAATGCCACCTAAAACGCCATCGCGAAACAAAGACCAAGAAAGTCTATCTACAGTATCCAGATCAGCGTTCCAACTCTAGGAAGTCATGAATCGAGCAAATTTCATTTCTTCAACTAGTATATTTGGAGGAACAATCCCAATGGCACTAAGATCAGACCAACCAAATCACTTCTTGGATAACATTTTTGACAAGACAAAACAACTTGACATTGTCAAGACCACTAGCCTCAAATAGGTGATACAAGCACTGGAATTAAATGTCTCATAGTAGGATTGCTTTTTGCCTTTTTGAATAAGATTACAGCATGGACAGGGGAAACCTGATCCTAGTCTGAGACGCTTTGGgggaatagcatgctattcacccgCCATTCGTTTGGGGTGGAGATCAAAGAAATGAAGATggtgtggtggaggtgtgtctacagatacactgtttTCTGACCTTCACtccctcataattccaccacctttatgCGCAATGAAATGATGAATAAGGTCCAGGAATCTGTCGGTTCCATGTGGAACATCTACtttgttttttaaaaacaaaaGTAGTAACACCATTCTctatgcactgtaatttacaaaaAATGGTAAGTGAGGTAAATAGGTAAAGGTAAATGAGTATACCTTATGGATAAGGGAATTGTAAATATCAATCAATCACAATAGTTTTAGATCTATTTTACCTTATGAACGCTGGAGACAAATACAAAACAAGtcatatggcagcaaactgaagtATACCAACATATCACCTTTTCCACAGTGAAGTTGATGAAATGCTGGGCTTAAACTTGAAGGCTTCTGCGCAAATGACAGTATAGCTCCAAACTTAGAGTCAATTTATATTTCATTGATCCTTAATATTCTGAACCGTTGTCTCCATACATTCTACTGAGTCTGTAGAGAAAATactaataaaaaaaaaaggtaccCCAAATTTAAAGGGATGGATTTAGATACATGTACTGAAAACCttgagaaaatctgttggccagcaagtgggagggttttcagcagttgaattgaaatgtattcaGAGCTCAAAAGGGAACCACGCCTGCAAAGCCCGCTACGCAcctgcataaggtaagtctgaatacaaACTTCTGAGACGTGCGTAGGAAAGGCGTGTATGTACTAAATCTGAAATCGGGCCCCTTATGAATACGGTCCCTGATTCCTGTAAAGTCTTAGAATCTAGATAGGCGCTTTACAGTTCCATCACTGGATTATGTCATATATTTATCTACTGGACCGATTATGTTTTCTGGCCATTGTGTTTGCATTGACAGCAAGTGTCAGTCAGTCAACTACTCTAACCTAGTGCTGAATGAAATGATATCACCTTCACATATATCTGATGGAGACAAGAATAGTCACGTAGCCACTCGCGAGCTTGCTCTATGAATCAGTGGATGAAATGAATCAGGTGTAATTTTTAGATTGTGCAGTTAACGTCAATCTGTCAATCATGTATTACCAATTGAGTTTGTAAATGCTGCACATGTAGACTTAAGCATAACACCACTTTAAAAGTCAAGTAAGTGACCTATTCCATAAAAACGCATTGGATTGAATCTTGGCCTTTTTCTCTAATCTGAGCCCACCAAAAGATGATTATTCCAAATTATCCAACAATAAGCATGACTAAGTACATTCAATTGGCAACATATGAGAAGAATGCTCCAACTGAAAAAGTGTTTTTGTTTGCATTCTGCCCATCACTATTGAACCCAGGTTCCCTACTTGTTGTTGACGCTGGTCTTTGACTCCCTGTACCACAGGCTGACCTCCATGCCTCCTGAGATGTCGATGGCCAAACCACCCTGAAACTCGGCATTGGCCTTCAGCCCAGACTGAAGCTGGATGACCTGAAATGAtgtaggagaagagagaaaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1834916 True 2523 lncRNA 0.41 2 22322363 22324915

Neighbor

gene id symbol gene type direction distance location
LOC100135859 LOC106602804 coding downstream 97089 22221848 ~ 22225274 (-)
LOC110498675 LOC106610021 coding downstream 135576 22155880 ~ 22186787 (-)
LOC110497506 mnd1 coding downstream 166541 22122397 ~ 22169711 (-)
LOC110497508 LOC106610024 coding downstream 201352 22008323 ~ 22121011 (-)
LOC110498676 NA coding downstream 321009 21999248 ~ 22001354 (-)
LOC110497500 LOC106609998 coding upstream 6162 22331077 ~ 22358393 (-)
LOC110497496 LOC106602722 coding upstream 162797 22487712 ~ 22497823 (-)
LOC110497495 LOC106610003 coding upstream 197077 22521992 ~ 22587011 (-)
LOC110497491 LOC106610007 coding upstream 363401 22688316 ~ 22694024 (-)
LOC118941547 LOC106610007 coding upstream 381261 22706176 ~ 22721341 (-)
G1602700 NA non-coding downstream 28972 22289381 ~ 22293391 (-)
G1602693 NA non-coding downstream 42759 22279262 ~ 22279604 (-)
G1602687 NA non-coding downstream 55540 22266402 ~ 22266823 (-)
G1602671 LOC105030945 non-coding downstream 74852 22243632 ~ 22247511 (-)
G1602656 NA non-coding downstream 103524 22218231 ~ 22218839 (-)
G1602718 NA non-coding upstream 15784 22340699 ~ 22402816 (-)
G1602732 LOC106602719 non-coding upstream 40908 22365823 ~ 22367574 (-)
G1602754 NA non-coding upstream 78967 22403882 ~ 22404083 (-)
G1602757 NA non-coding upstream 83149 22408064 ~ 22408293 (-)
G1602764 NA non-coding upstream 92267 22417182 ~ 22417496 (-)
G1600030 NA other downstream 2185802 20127211 ~ 20136561 (-)
G1600014 LOC106609977 other downstream 2213572 20107915 ~ 20108791 (-)
G1599758 LOC106609957 other downstream 2680360 19638760 ~ 19642003 (-)
G1599760 LOC106609957 other downstream 2685336 19636018 ~ 19637027 (-)
G1599717 NA other downstream 2765006 19555597 ~ 19557357 (-)
G1602753 NA other upstream 78601 22403516 ~ 22403837 (-)
G1602763 NA other upstream 90503 22415418 ~ 22416043 (-)
LOC110497482 LOC106610017 other upstream 816901 23121508 ~ 23168994 (-)
G1604902 NA other upstream 1648875 23973790 ~ 23974106 (-)
gpr137c LOC106602981 other upstream 1865783 24176332 ~ 24206622 (-)

Expression


Co-expression Network