Gene
RNA
| Item | Value |
|---|---|
| gene id | G1602732 |
| gene name | LOC106602719 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 22365823 ~ 22367574 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1834937 | True | 381 | lncRNA | 0.60 | 2 | 22365823 | 22367574 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497500 | LOC106609998 | coding | downstream | 7430 | 22331077 ~ 22358393 (-) |
| LOC100135859 | LOC106602804 | coding | downstream | 140549 | 22221848 ~ 22225274 (-) |
| LOC110498675 | LOC106610021 | coding | downstream | 179036 | 22155880 ~ 22186787 (-) |
| LOC110497506 | mnd1 | coding | downstream | 210001 | 22122397 ~ 22169711 (-) |
| LOC110497508 | LOC106610024 | coding | downstream | 244812 | 22008323 ~ 22121011 (-) |
| LOC110497496 | LOC106602722 | coding | upstream | 120138 | 22487712 ~ 22497823 (-) |
| LOC110497495 | LOC106610003 | coding | upstream | 154418 | 22521992 ~ 22587011 (-) |
| LOC110497491 | LOC106610007 | coding | upstream | 320742 | 22688316 ~ 22694024 (-) |
| LOC118941547 | LOC106610007 | coding | upstream | 338602 | 22706176 ~ 22721341 (-) |
| LOC110497487 | LOC106610012 | coding | upstream | 482141 | 22849715 ~ 22907220 (-) |
| G1602714 | NA | non-coding | downstream | 40908 | 22322363 ~ 22324915 (-) |
| G1602700 | NA | non-coding | downstream | 72432 | 22289381 ~ 22293391 (-) |
| G1602693 | NA | non-coding | downstream | 86219 | 22279262 ~ 22279604 (-) |
| G1602687 | NA | non-coding | downstream | 99000 | 22266402 ~ 22266823 (-) |
| G1602671 | LOC105030945 | non-coding | downstream | 118312 | 22243632 ~ 22247511 (-) |
| G1602754 | NA | non-coding | upstream | 36308 | 22403882 ~ 22404083 (-) |
| G1602757 | NA | non-coding | upstream | 40490 | 22408064 ~ 22408293 (-) |
| G1602764 | NA | non-coding | upstream | 49608 | 22417182 ~ 22417496 (-) |
| G1602769 | NA | non-coding | upstream | 56082 | 22423656 ~ 22424798 (-) |
| G1602804 | NA | non-coding | upstream | 103550 | 22471124 ~ 22518975 (-) |
| G1600030 | NA | other | downstream | 2229262 | 20127211 ~ 20136561 (-) |
| G1600014 | LOC106609977 | other | downstream | 2257032 | 20107915 ~ 20108791 (-) |
| G1599758 | LOC106609957 | other | downstream | 2723820 | 19638760 ~ 19642003 (-) |
| G1599760 | LOC106609957 | other | downstream | 2728796 | 19636018 ~ 19637027 (-) |
| G1599717 | NA | other | downstream | 2808466 | 19555597 ~ 19557357 (-) |
| G1602753 | NA | other | upstream | 35942 | 22403516 ~ 22403837 (-) |
| G1602763 | NA | other | upstream | 47844 | 22415418 ~ 22416043 (-) |
| LOC110497482 | LOC106610017 | other | upstream | 774242 | 23121508 ~ 23168994 (-) |
| G1604902 | NA | other | upstream | 1606216 | 23973790 ~ 23974106 (-) |
| gpr137c | LOC106602981 | other | upstream | 1823124 | 24176332 ~ 24206622 (-) |
