G1602277


Basic Information

Item Value
gene id G1602277
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 22524095 ~ 22526843 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1834402
CCCCCTTCTTTCCCCAGCCTCAGAATGTCCTCCAGAATGGCATTTTTCAACTCCTTGCTTGCGCACATCTCCAAATAAGAACCCTCGATGCCCTTCTTCTTTGCCCATCCTGGTAAGAAGTCTGGATCAGGCACCACAATGCCCA

Function

NR:

description
long-chain-fatty-acid--CoA ligase 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1834402 True 145 lncRNA 0.51 2 22524095 22526843

Neighbor

gene id symbol gene type direction distance location
LOC110497497 primpol coding upstream 14829 22497979 ~ 22509266 (+)
LOC110497498 LOC106610000 coding upstream 61986 22423424 ~ 22462109 (+)
LOC110497499 LOC106610000 coding upstream 123280 22394506 ~ 22401330 (+)
LOC110497502 LOC106609999 coding upstream 142358 22365792 ~ 22381737 (+)
LOC110497503 LOC106609996 coding upstream 197687 22289242 ~ 22326408 (+)
LOC110497494 LOC106610031 coding downstream 86297 22613140 ~ 22615169 (+)
LOC110497493 LOC100194655 coding downstream 156987 22683830 ~ 22686430 (+)
trnar-ucu-8 NA coding downstream 177861 22704704 ~ 22704795 (+)
LOC110497490 LOC106610008 coding downstream 231690 22758533 ~ 22773112 (+)
LOC110497489 LOC106610009 coding downstream 252602 22779445 ~ 22830551 (+)
G1602275 NA non-coding upstream 238 22521999 ~ 22523857 (+)
G1602264 NA non-coding upstream 11924 22504997 ~ 22512171 (+)
G1602249 NA non-coding upstream 39223 22476980 ~ 22484872 (+)
G1602233 NA non-coding upstream 74171 22449515 ~ 22449924 (+)
G1602222 NA non-coding upstream 91952 22429880 ~ 22432143 (+)
G1602297 NA non-coding downstream 36250 22563093 ~ 22566067 (+)
G1602306 NA non-coding downstream 52549 22579392 ~ 22579633 (+)
G1602934 NA non-coding downstream 247920 22774763 ~ 22787472 (+)
G1603079 LOC106602736 non-coding downstream 413267 22940110 ~ 22944324 (+)
G1603125 NA non-coding downstream 483288 23010131 ~ 23010757 (+)
G1602216 NA other upstream 106546 22417202 ~ 22417549 (+)
G1602007 LOC106610024 other upstream 503096 22019067 ~ 22020999 (+)
G1601872 LOC106610027 other upstream 720205 21803193 ~ 21803890 (+)
G1601848 LOC106610028 other upstream 747343 21763166 ~ 21784919 (+)
G1605451 sptlc2 other downstream 2324332 24851175 ~ 24853937 (+)
G1606716 NA other downstream 3297641 25824484 ~ 25824826 (+)
LOC118941466 NA other downstream 3446502 25973345 ~ 26002713 (+)
LOC110497557 gcfc2 other downstream 3737446 26261361 ~ 26279307 (+)
G1607702 NA other downstream 4993120 27519963 ~ 27522078 (+)

Expression


Co-expression Network