G1602306


Basic Information

Item Value
gene id G1602306
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 22579392 ~ 22579633 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1834433
ctaaatagcttttagctaattagctagttagcttctggAGATTCTTTaatgtgttctaaaattgattccgtatcacattgagtgaggcaggttaccggaaggtataatcgaataaAATAAAAATCGAGAAGAGattgaaatactgtatatatatatacatacacaaaaaaaatacaaaagtacacgaaaggacaaaacaaacacatcttcactgctacgc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1834433 True 220 lncRNA 0.32 2 22579392 22579633

Neighbor

gene id symbol gene type direction distance location
LOC110497497 primpol coding upstream 70126 22497979 ~ 22509266 (+)
LOC110497498 LOC106610000 coding upstream 117283 22423424 ~ 22462109 (+)
LOC110497499 LOC106610000 coding upstream 178577 22394506 ~ 22401330 (+)
LOC110497502 LOC106609999 coding upstream 197655 22365792 ~ 22381737 (+)
LOC110497503 LOC106609996 coding upstream 252984 22289242 ~ 22326408 (+)
LOC110497494 LOC106610031 coding downstream 33507 22613140 ~ 22615169 (+)
LOC110497493 LOC100194655 coding downstream 104197 22683830 ~ 22686430 (+)
trnar-ucu-8 NA coding downstream 125071 22704704 ~ 22704795 (+)
LOC110497490 LOC106610008 coding downstream 178900 22758533 ~ 22773112 (+)
LOC110497489 LOC106610009 coding downstream 199812 22779445 ~ 22830551 (+)
G1602297 NA non-coding upstream 13325 22563093 ~ 22566067 (+)
G1602277 NA non-coding upstream 52549 22524095 ~ 22526843 (+)
G1602275 NA non-coding upstream 55535 22521999 ~ 22523857 (+)
G1602264 NA non-coding upstream 67221 22504997 ~ 22512171 (+)
G1602249 NA non-coding upstream 94520 22476980 ~ 22484872 (+)
G1602934 NA non-coding downstream 195130 22774763 ~ 22787472 (+)
G1603079 LOC106602736 non-coding downstream 360477 22940110 ~ 22944324 (+)
G1603125 NA non-coding downstream 430498 23010131 ~ 23010757 (+)
G1603360 NA non-coding downstream 445132 23024765 ~ 23024980 (+)
G1603385 NA non-coding downstream 481815 23061448 ~ 23066827 (+)
G1602216 NA other upstream 161843 22417202 ~ 22417549 (+)
G1602007 LOC106610024 other upstream 558393 22019067 ~ 22020999 (+)
G1601872 LOC106610027 other upstream 775502 21803193 ~ 21803890 (+)
G1601848 LOC106610028 other upstream 802640 21763166 ~ 21784919 (+)
G1605451 sptlc2 other downstream 2271542 24851175 ~ 24853937 (+)
G1606716 NA other downstream 3244851 25824484 ~ 25824826 (+)
LOC118941466 NA other downstream 3393712 25973345 ~ 26002713 (+)
LOC110497557 gcfc2 other downstream 3684656 26261361 ~ 26279307 (+)
G1607702 NA other downstream 4940330 27519963 ~ 27522078 (+)

Expression


Co-expression Network