Gene
RNA
| Item | Value |
|---|---|
| gene id | G1603125 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 23010131 ~ 23010757 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1835377 | True | 512 | lncRNA | 0.41 | 2 | 23010131 | 23010757 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497488 | LOC106602733 | coding | upstream | 168859 | 22839013 ~ 22841272 (+) |
| LOC110497489 | LOC106610009 | coding | upstream | 179580 | 22779445 ~ 22830551 (+) |
| LOC110497490 | LOC106610008 | coding | upstream | 237019 | 22758533 ~ 22773112 (+) |
| trnar-ucu-8 | NA | coding | upstream | 305336 | 22704704 ~ 22704795 (+) |
| LOC110497493 | LOC100194655 | coding | upstream | 323701 | 22683830 ~ 22686430 (+) |
| LOC110497483 | LOC106610016 | coding | downstream | 93392 | 23104149 ~ 23116038 (+) |
| LOC110497481 | LOC106610019 | coding | downstream | 163759 | 23174516 ~ 23221212 (+) |
| LOC110498672 | LOC106610020 | coding | downstream | 256555 | 23267312 ~ 23307598 (+) |
| LOC110497479 | LOC106602886 | coding | downstream | 748765 | 23759522 ~ 23804586 (+) |
| LOC110498687 | socs4 | coding | downstream | 967622 | 23978379 ~ 23979684 (+) |
| G1603079 | LOC106602736 | non-coding | upstream | 65807 | 22940110 ~ 22944324 (+) |
| G1602934 | NA | non-coding | upstream | 222659 | 22774763 ~ 22787472 (+) |
| G1602306 | NA | non-coding | upstream | 430498 | 22579392 ~ 22579633 (+) |
| G1602297 | NA | non-coding | upstream | 444064 | 22563093 ~ 22566067 (+) |
| G1602277 | NA | non-coding | upstream | 483288 | 22524095 ~ 22526843 (+) |
| G1603360 | NA | non-coding | downstream | 14008 | 23024765 ~ 23024980 (+) |
| G1603385 | NA | non-coding | downstream | 50691 | 23061448 ~ 23066827 (+) |
| G1603490 | NA | non-coding | downstream | 211608 | 23222365 ~ 23222623 (+) |
| G1603593 | NA | non-coding | downstream | 368675 | 23379432 ~ 23379817 (+) |
| LOC110497498 | LOC106610000 | other | upstream | 548509 | 22423424 ~ 22462109 (+) |
| G1602216 | NA | other | upstream | 592582 | 22417202 ~ 22417549 (+) |
| G1602007 | LOC106610024 | other | upstream | 989132 | 22019067 ~ 22020999 (+) |
| G1601872 | LOC106610027 | other | upstream | 1206241 | 21803193 ~ 21803890 (+) |
| G1601848 | LOC106610028 | other | upstream | 1233379 | 21763166 ~ 21784919 (+) |
| G1605451 | sptlc2 | other | downstream | 1840418 | 24851175 ~ 24853937 (+) |
| G1606716 | NA | other | downstream | 2813727 | 25824484 ~ 25824826 (+) |
| LOC118941466 | NA | other | downstream | 2962588 | 25973345 ~ 26002713 (+) |
| LOC110497557 | gcfc2 | other | downstream | 3253532 | 26261361 ~ 26279307 (+) |
| G1607702 | NA | other | downstream | 4509206 | 27519963 ~ 27522078 (+) |
