XLOC_035358 (rasal1b)


Basic Information

Item Value
gene id XLOC_035358
gene name rasal1b
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007119.7
NCBI id CM002892.2
chromosome length 54304671
location 1651821 ~ 1682945 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00069432
GCAGCTGAAGATCTTCATGACATGAGGCTGAGCTGCTGGATGAAGAGCTCAACATCTTCATCATGGCCAGAAACACTTCTCTGTACTTTCGCATCGTCGAGGGGAAAAACCTGCCTGCTAAAGATGTCTCTGGAACCAGTGATCCATATTGCATCGTTAAAGTCGACAATGAGGTCGTGGCCAGAACTGCGACCGTCTGGAAAAACTTGAATCCATTCTGGGGTGAAGAATACACTCTTCATCTGCCAATGGGCTTCCATACGCTCACCTTTTACGTGATGGACGAGGACACGATTGGTCATGATGATGTCATCGGTAAGATCTCTCTGAGTAAAGACGTGATCGCAGCTCAACACAAAGGTCTGGATAACTGGTTAAATCTGACTCGCGTGGATCCTGATGAGGAGGTTCAGGGTGAGATTCATTTGGCTCTGGAGCTGCAGAGAGAAAAGCACAGATCCTGCCTGAGCTGCCACATCATCGAGGCTCGTGATTTGGCTCCGCGTGATATCACCGGCACGTCTGATCCCTTCACCAGAATCATCTACAACAACCTCAGCGCTGAGACATCGGTGAGATTATCTTCATCCAGATGCTgaaca
>TCONS_00069433
ATGGCCAGAAACACTTCTCTGTACTTTCGCATCGTCGAGGGGAAAAACCTGCCTGCTAAAGATGTCTCTGGAACCAGTGATCCATATTGCATCGTTAAAGTCGACAATGAGGTCGTGGCCAGAACTGCGACCGTCTGGAAAAACTTGAATCCATTCTGGGGTGAAGAATACACTCTTCATCTGCCAATGGGCTTCCATACGCTCACCTTTTACGTGATGGACGAGGACACGATTGGTCATGATGATGTCATCGGTAAGATCTCTCTGAGTAAAGACGTGATCGCAGCTCAACACAAAGGTCTGGATAACTGGTTAAATCTGACTCGCGTGGATCCTGATGAGGAGGTTCAGGGTGAGATTCATTTGGCTCTGGAGCTGCAGAGAGAAAAGCACAGATCCTGCCTGAGCTGCCACATCATCGAGGCTCGTGATTTGGCTCCGCGTGATATCACCGGCACGTCTGATCCCTTCACCAGAATCATCTACAACAACCTCAGCGCTGAGACATCGATCATAAAGAAGACACGGTTCCCTCACTGGGACGAGACTCTGGAGCTCTGTCTGGATGAAGCTGATGAAGATGAGGGAGGAATGGTCACGGTGGAGGTCTGGGACTGGGACATGGTGGGGAAGAACGACTTTTTGGGGAAGGTGAGCGCACAGTTTCACCTATCTCCTGTCCTGCAGGGCTGGTTTCGGCTGATGCCACTGGGAAACACAGAGGACAATGCCgggtgtgtatgtgcatgtgttatACAGCGCATACACATTCATTAa

Function

symbol description
rasal1b Predicted to enable phospholipid binding activity. Predicted to act upstream of or within negative regulation of Ras protein signal transduction.

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000041515

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00069432 False 602 mRNA 0.49 6 1651821 1680400
TCONS_00069433 True 777 mRNA 0.50 8 1651883 1682945

Neighbor

gene id symbol gene type direction distance location
XLOC_035357 efna5b coding upstream 205614 1433647 ~ 1446207 (+)
XLOC_035356 fbxl17 coding upstream 347316 1284784 ~ 1304505 (+)
XLOC_035355 NA coding upstream 382849 1267953 ~ 1268972 (+)
XLOC_035354 NA coding upstream 424752 1220600 ~ 1227069 (+)
XLOC_035353 NA coding upstream 438922 1210300 ~ 1212899 (+)
XLOC_035359 serpind1 coding downstream 83261 1766206 ~ 1781733 (+)
XLOC_035360 CU326361.2 coding downstream 84960 1767905 ~ 1768021 (+)
XLOC_035361 snap29 coding downstream 156750 1839695 ~ 1856656 (+)
XLOC_035362 CR788303.1 coding downstream 243233 1926178 ~ 1930239 (+)
XLOC_035363 FQ377940.1 coding downstream 296878 1979823 ~ 1979937 (+)
XLOC_035350 NA non-coding upstream 488580 1158751 ~ 1163241 (+)
XLOC_035343 CT027631.1 non-coding upstream 671993 944232 ~ 979828 (+)
XLOC_035364 NA non-coding downstream 314490 1997435 ~ 1998562 (+)
XLOC_035365 NA non-coding downstream 484017 2166962 ~ 2176376 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000157_00461142_00492335 RASAL1 coding CI01000157 null 460833 ~ 492787 (+)
bowfin (Amia calva) G119929 NA non-coding CM030135.1 CM030135.1 27465387 ~ 27468649 (-)