Gene
RNA
| Item | Value |
|---|---|
| gene id | G1609001 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 27232291 ~ 27291107 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1841833 | True | 224 | lncRNA | 0.45 | 2 | 27232291 | 27291107 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497591 | LOC106603863 | coding | downstream | 59107 | 27168907 ~ 27173184 (-) |
| LOC110497590 | stx11 | coding | downstream | 71276 | 27155132 ~ 27161015 (-) |
| trnal-uaa-59 | NA | coding | downstream | 78591 | 27153618 ~ 27153700 (-) |
| LOC110498695 | NA | coding | downstream | 92834 | 27131709 ~ 27139457 (-) |
| shprh | shprh | coding | downstream | 319823 | 26887874 ~ 26912468 (-) |
| ahi1 | ahi1 | coding | upstream | 104743 | 27395850 ~ 27414739 (-) |
| LOC110497599 | LOC106603601 | coding | upstream | 133719 | 27424826 ~ 27440075 (-) |
| LOC110497600 | LOC100196682 | coding | upstream | 149793 | 27440900 ~ 27448264 (-) |
| trnaa-agc-7 | NA | coding | upstream | 221044 | 27512151 ~ 27512223 (-) |
| LOC110497601 | LOC106603641 | coding | upstream | 221754 | 27512861 ~ 27522127 (-) |
| G1608904 | NA | non-coding | downstream | 166814 | 27063727 ~ 27065477 (-) |
| G1608863 | NA | non-coding | downstream | 194516 | 27035302 ~ 27037775 (-) |
| G1608712 | NA | non-coding | downstream | 268992 | 26698692 ~ 26963299 (-) |
| G1608804 | LOC106603381 | non-coding | downstream | 374802 | 26856243 ~ 26857489 (-) |
| G1608763 | NA | non-coding | downstream | 465132 | 26766851 ~ 26767159 (-) |
| G1609062 | NA | non-coding | upstream | 93370 | 27384477 ~ 27387965 (-) |
| G1609081 | NA | non-coding | upstream | 126835 | 27417942 ~ 27418188 (-) |
| G1609082 | NA | non-coding | upstream | 127300 | 27418407 ~ 27418633 (-) |
| G1609103 | NA | non-coding | upstream | 180652 | 27471759 ~ 27472034 (-) |
| G1609105 | NA | non-coding | upstream | 182902 | 27474009 ~ 27474405 (-) |
| G1608992 | NA | other | downstream | 24937 | 27206230 ~ 27207354 (-) |
| G1608988 | LOC106603498 | other | downstream | 30556 | 27195748 ~ 27201735 (-) |
| G1608844 | LOC106603413 | other | downstream | 290911 | 26937870 ~ 26941380 (-) |
| G1608576 | NA | other | downstream | 621308 | 26584938 ~ 26610983 (-) |
| nkx2.9 | nkx2-8 | other | upstream | 587354 | 27877963 ~ 27879920 (-) |
| plekhh1 | LOC106602716 | other | upstream | 945489 | 28205649 ~ 28269202 (-) |
| crip1 | crip1 | other | upstream | 1351181 | 28642288 ~ 28650251 (-) |
| mideasb | elmsan1 | other | upstream | 1433148 | 28704168 ~ 28735490 (-) |
| G1610194 | ttbk2 | other | upstream | 1498314 | 28789421 ~ 28790413 (-) |
