Gene
RNA
| Item | Value |
|---|---|
| gene id | G1609103 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 27471759 ~ 27472034 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1841950 | True | 276 | lncRNA | 0.30 | 1 | 27471759 | 27472034 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110497600 | LOC100196682 | coding | downstream | 23495 | 27440900 ~ 27448264 (-) |
| LOC110497599 | LOC106603601 | coding | downstream | 31684 | 27424826 ~ 27440075 (-) |
| ahi1 | ahi1 | coding | downstream | 57020 | 27395850 ~ 27414739 (-) |
| syne1b | LOC106603506 | coding | downstream | 120870 | 27213284 ~ 27350889 (-) |
| LOC110497591 | LOC106603863 | coding | downstream | 298575 | 27168907 ~ 27173184 (-) |
| trnaa-agc-7 | NA | coding | upstream | 40117 | 27512151 ~ 27512223 (-) |
| LOC110497601 | LOC106603641 | coding | upstream | 40827 | 27512861 ~ 27522127 (-) |
| LOC110497602 | LOC106603645 | coding | upstream | 52611 | 27524645 ~ 27541304 (-) |
| LOC110497603 | LOC106603656 | coding | upstream | 69814 | 27541848 ~ 27609849 (-) |
| dtnbb | LOC106603664 | coding | upstream | 142232 | 27610624 ~ 27705444 (-) |
| G1609082 | NA | non-coding | downstream | 53126 | 27418407 ~ 27418633 (-) |
| G1609081 | NA | non-coding | downstream | 53571 | 27417942 ~ 27418188 (-) |
| G1609062 | NA | non-coding | downstream | 83794 | 27384477 ~ 27387965 (-) |
| G1609001 | NA | non-coding | downstream | 180652 | 27232291 ~ 27291107 (-) |
| G1608904 | NA | non-coding | downstream | 406282 | 27063727 ~ 27065477 (-) |
| G1609105 | NA | non-coding | upstream | 1975 | 27474009 ~ 27474405 (-) |
| G1609106 | NA | non-coding | upstream | 2509 | 27474543 ~ 27474962 (-) |
| G1609107 | NA | non-coding | upstream | 6622 | 27478656 ~ 27479064 (-) |
| G1609108 | NA | non-coding | upstream | 10566 | 27482600 ~ 27482868 (-) |
| G1609112 | NA | non-coding | upstream | 19436 | 27491470 ~ 27491683 (-) |
| G1608992 | NA | other | downstream | 264405 | 27206230 ~ 27207354 (-) |
| G1608988 | LOC106603498 | other | downstream | 270024 | 27195748 ~ 27201735 (-) |
| G1608844 | LOC106603413 | other | downstream | 530379 | 26937870 ~ 26941380 (-) |
| shprh | shprh | other | downstream | 559322 | 26887874 ~ 26912468 (-) |
| G1608576 | NA | other | downstream | 860776 | 26584938 ~ 26610983 (-) |
| nkx2.9 | nkx2-8 | other | upstream | 406427 | 27877963 ~ 27879920 (-) |
| plekhh1 | LOC106602716 | other | upstream | 764562 | 28205649 ~ 28269202 (-) |
| crip1 | crip1 | other | upstream | 1170254 | 28642288 ~ 28650251 (-) |
| mideasb | elmsan1 | other | upstream | 1252221 | 28704168 ~ 28735490 (-) |
| G1610194 | ttbk2 | other | upstream | 1317387 | 28789421 ~ 28790413 (-) |
