G1610194 (ttbk2)


Basic Information

Item Value
gene id G1610194
gene name ttbk2
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 28789421 ~ 28790413 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1843130
GGTGGCTTGCCCGGGGGTGGGCGTGGTAGGTACTGTGCAGCTCGCTCCTGCTCTGTGGCCGGGTTAGGAAGGTTAACAGGGCGAGGGATCCTGCTCTTACGGGACAGGgggctggaggaggaggacagggagggggcATCGTCCCCCTGGCGGTCGGAGCGTGACCCCAGGAATGACTCATCGGCCGTCTCAGAGCGGTCCGAGGCGGAGGACAGCTGTTCCCCGCGGGGGAGTGAGGCCATCATGGAGCcgcggtgggagagagagggagaggctgtgggagagggggctgggtggTGGCCTCCTCCCTGGTGGTGGTGGGCTTTCTTCTGAAGCAGCTTCTCCATGGCAGAGCCAGGAGTGGGGAGGAGGTCCAGCAGACTGGAGGGTTCCAGGACAGGGATACGGCTCAGCCTGCGGGAGGGGTTCCTACGGGGGGCGGAGGGCAGGGAGGAGGGGGTTAGTGCTGGGGCTGGGTCACTGGTCTCCACCCCATCTCCCCTATCTGGCCGGGGCTGGTCACTCTCATGGTCCTTCAGCTCTGGGAAGGCTCCACTGCTGCCATCCCCCTGGCCGTAagctgggggagagagatggcCGTTGACTAGCCCTAATACTGGGCTGTGGGGGGAGCGGGGGGAGCGTGGAGAATGAGAACGGGGAGAATTAGGAGAAACGGGAGAGCGAGGGGAGTGAGGAGAAGACATTCGGCTTGGCACAGGACTGTGGGCTTTGGTATGGGTCTGGGTGTTGGTGTCTCCTCCGTTGACCAGGGTATCTGCCAGGAGGTCATCCAGAGTGGTGGGACTGGCGGGCTGGCTGCCAGGCTGGGTAAAGGTATGGTTAGGGGTGGGCAGGCGCTCCTGGCCCTGGGAGGAGTGGATATCAGCGGTAGCAGTATTATCCTGCGGCTGCTTGGCCTCAGCTGCGGCTTCACCTCGTCTCTCCAGCAGGAGGCAATGTGGAGCACTGTCTGAGCCTGACTGGGACCGC

Function

symbol description
ttbk2 Enables kinesin binding activity and protein serine/threonine kinase activity. Involved in several processes, including negative regulation of microtubule binding activity; negative regulation of microtubule depolymerization; and negative regulation of protein localization to microtubule. Located in several cellular components, including ciliary transition zone; cytoskeleton; and cytosol. Implicated in spinocerebellar ataxia type 11.

NR:

description
tau-tubulin kinase 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1843130 True 993 TUCP 0.65 1 28789421 28790413

Neighbor

gene id symbol gene type direction distance location
tmem62 tmem62 coding downstream 23218 28757259 ~ 28766203 (-)
mideasb elmsan1 coding downstream 53931 28704168 ~ 28735490 (-)
crip1 crip1 coding downstream 139170 28642288 ~ 28650251 (-)
mta1 mta1 coding downstream 238964 28505887 ~ 28550457 (-)
tmem229b LOC106602701 coding downstream 283853 28491101 ~ 28505568 (-)
LOC110497632 snap23 coding upstream 144666 28935079 ~ 28957730 (-)
LOC110497635 LOC106602575 coding upstream 218402 29008815 ~ 29090489 (-)
LOC110498568 NA coding upstream 418411 29208824 ~ 29212107 (-)
LOC110498326 LOC106602473 coding upstream 926649 29717062 ~ 29729253 (-)
si:dkey-288a3.2 LOC106601776 coding upstream 2157040 30911393 ~ 30988951 (-)
G1610192 NA non-coding downstream 1782 28787356 ~ 28787639 (-)
G1610191 ttbk2 non-coding downstream 4544 28784301 ~ 28784877 (-)
G1610190 NA non-coding downstream 5889 28783307 ~ 28783532 (-)
G1610189 ttbk2 non-coding downstream 6584 28782620 ~ 28782837 (-)
G1610185 ttbk2 non-coding downstream 13507 28775693 ~ 28775914 (-)
G1610193 NA non-coding upstream 309 28790722 ~ 28793590 (-)
G1610197 cdan1 non-coding upstream 8968 28799381 ~ 28799822 (-)
G1610211 NA non-coding upstream 25965 28816378 ~ 28816600 (-)
G1610225 NA non-coding upstream 50626 28841039 ~ 28841275 (-)
G1610227 NA non-coding upstream 52435 28842848 ~ 28843077 (-)
plekhh1 LOC106602716 other downstream 520276 28205649 ~ 28269202 (-)
nkx2.9 nkx2-8 other downstream 910605 27877963 ~ 27879920 (-)
G1608992 NA other downstream 1582067 27206230 ~ 27207354 (-)
G1611350 NA other upstream 1095932 29886345 ~ 29886690 (-)
G1611392 NA other upstream 1156987 29947400 ~ 29955786 (-)
G1611431 LOC106602420 other upstream 1244505 30034918 ~ 30035682 (-)
G1613218 NA other upstream 2672708 31463121 ~ 31463896 (-)
G1613722 hipl1 other upstream 2929509 31719922 ~ 31807247 (-)

Expression


Co-expression Network