Gene
RNA
| Item | Value |
|---|---|
| gene id | G1610197 |
| gene name | cdan1 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 28799381 ~ 28799822 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| cdan1 | Is expressed in female organism. Human ortholog(s) of this gene implicated in congenital dyserythropoietic anemia and congenital dyserythropoietic anemia type Ia. Orthologous to human CDAN1 (codanin 1). |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1843133 | True | 292 | lncRNA | 0.56 | 2 | 28799381 | 28799822 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| tmem62 | tmem62 | coding | downstream | 33178 | 28757259 ~ 28766203 (-) |
| mideasb | elmsan1 | coding | downstream | 63891 | 28704168 ~ 28735490 (-) |
| crip1 | crip1 | coding | downstream | 149130 | 28642288 ~ 28650251 (-) |
| mta1 | mta1 | coding | downstream | 248924 | 28505887 ~ 28550457 (-) |
| tmem229b | LOC106602701 | coding | downstream | 293813 | 28491101 ~ 28505568 (-) |
| LOC110497632 | snap23 | coding | upstream | 135257 | 28935079 ~ 28957730 (-) |
| LOC110497635 | LOC106602575 | coding | upstream | 208993 | 29008815 ~ 29090489 (-) |
| LOC110498568 | NA | coding | upstream | 409002 | 29208824 ~ 29212107 (-) |
| LOC110498326 | LOC106602473 | coding | upstream | 917240 | 29717062 ~ 29729253 (-) |
| si:dkey-288a3.2 | LOC106601776 | coding | upstream | 2147631 | 30911393 ~ 30988951 (-) |
| G1610193 | NA | non-coding | downstream | 5791 | 28790722 ~ 28793590 (-) |
| G1610192 | NA | non-coding | downstream | 11742 | 28787356 ~ 28787639 (-) |
| G1610191 | ttbk2 | non-coding | downstream | 14504 | 28784301 ~ 28784877 (-) |
| G1610190 | NA | non-coding | downstream | 15849 | 28783307 ~ 28783532 (-) |
| G1610189 | ttbk2 | non-coding | downstream | 16544 | 28782620 ~ 28782837 (-) |
| G1610211 | NA | non-coding | upstream | 16556 | 28816378 ~ 28816600 (-) |
| G1610225 | NA | non-coding | upstream | 41217 | 28841039 ~ 28841275 (-) |
| G1610227 | NA | non-coding | upstream | 43026 | 28842848 ~ 28843077 (-) |
| G1610229 | NA | non-coding | upstream | 45340 | 28845162 ~ 28845511 (-) |
| G1610194 | ttbk2 | other | downstream | 8968 | 28789421 ~ 28790413 (-) |
| plekhh1 | LOC106602716 | other | downstream | 530236 | 28205649 ~ 28269202 (-) |
| nkx2.9 | nkx2-8 | other | downstream | 920565 | 27877963 ~ 27879920 (-) |
| G1611350 | NA | other | upstream | 1086523 | 29886345 ~ 29886690 (-) |
| G1611392 | NA | other | upstream | 1147578 | 29947400 ~ 29955786 (-) |
| G1611431 | LOC106602420 | other | upstream | 1235096 | 30034918 ~ 30035682 (-) |
| G1613218 | NA | other | upstream | 2663299 | 31463121 ~ 31463896 (-) |
| G1613722 | hipl1 | other | upstream | 2920100 | 31719922 ~ 31807247 (-) |
