Gene
RNA
| Item | Value |
|---|---|
| gene id | G1611337 |
| gene name | LOC106602443 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 29881215 ~ 29881587 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1844385 | True | 373 | lncRNA | 0.56 | 1 | 29881215 | 29881587 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498326 | LOC106602473 | coding | downstream | 151962 | 29717062 ~ 29729253 (-) |
| LOC110498568 | NA | coding | downstream | 669108 | 29208824 ~ 29212107 (-) |
| LOC110497635 | LOC106602575 | coding | downstream | 790726 | 29008815 ~ 29090489 (-) |
| LOC110497632 | snap23 | coding | downstream | 923485 | 28935079 ~ 28957730 (-) |
| tmem62 | tmem62 | coding | downstream | 1115012 | 28757259 ~ 28766203 (-) |
| si:dkey-288a3.2 | LOC106601776 | coding | upstream | 1065866 | 30911393 ~ 30988951 (-) |
| bcl11ba | LOC106601761 | coding | upstream | 1685766 | 31567353 ~ 31629055 (-) |
| setd3 | LOC106602337 | coding | upstream | 1772075 | 31653662 ~ 31717607 (-) |
| ccdc85ca | LOC106602325 | coding | upstream | 1851425 | 31730827 ~ 31790808 (-) |
| haus2 | haus2 | coding | upstream | 1932879 | 31814466 ~ 31822631 (-) |
| G1611338 | NA | non-coding | downstream | 188 | 29880499 ~ 29881027 (-) |
| G1611345 | NA | non-coding | downstream | 5535 | 29875407 ~ 29875680 (-) |
| G1611343 | NA | non-coding | downstream | 6237 | 29874746 ~ 29874978 (-) |
| G1611237 | NA | non-coding | downstream | 178046 | 29702956 ~ 29703169 (-) |
| G1611215 | NA | non-coding | downstream | 189503 | 29676826 ~ 29691712 (-) |
| G1611352 | NA | non-coding | upstream | 8447 | 29890034 ~ 29890304 (-) |
| G1611353 | NA | non-coding | upstream | 9645 | 29891232 ~ 29891481 (-) |
| G1611355 | NA | non-coding | upstream | 10778 | 29892365 ~ 29892602 (-) |
| G1611363 | NA | non-coding | upstream | 26747 | 29908334 ~ 29908648 (-) |
| G1611392 | NA | non-coding | upstream | 65813 | 29947400 ~ 29955786 (-) |
| G1610194 | ttbk2 | other | downstream | 1090802 | 28789421 ~ 28790413 (-) |
| mideasb | elmsan1 | other | downstream | 1149669 | 28704168 ~ 28735490 (-) |
| crip1 | crip1 | other | downstream | 1231151 | 28642288 ~ 28650251 (-) |
| plekhh1 | LOC106602716 | other | downstream | 1612070 | 28205649 ~ 28269202 (-) |
| nkx2.9 | nkx2-8 | other | downstream | 2002399 | 27877963 ~ 27879920 (-) |
| G1611350 | NA | other | upstream | 4758 | 29886345 ~ 29886690 (-) |
| G1611431 | LOC106602420 | other | upstream | 153331 | 30034918 ~ 30035682 (-) |
| G1613218 | NA | other | upstream | 1581534 | 31463121 ~ 31463896 (-) |
| G1613722 | hipl1 | other | upstream | 1838335 | 31719922 ~ 31807247 (-) |
