Gene
RNA
| Item | Value |
|---|---|
| gene id | G1611413 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 30008157 ~ 30008418 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC106912169 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1844476 | True | 262 | lncRNA | 0.42 | 1 | 30008157 | 30008418 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498326 | LOC106602473 | coding | downstream | 278904 | 29717062 ~ 29729253 (-) |
| LOC110498568 | NA | coding | downstream | 796050 | 29208824 ~ 29212107 (-) |
| LOC110497635 | LOC106602575 | coding | downstream | 917668 | 29008815 ~ 29090489 (-) |
| LOC110497632 | snap23 | coding | downstream | 1050427 | 28935079 ~ 28957730 (-) |
| tmem62 | tmem62 | coding | downstream | 1241954 | 28757259 ~ 28766203 (-) |
| si:dkey-288a3.2 | LOC106601776 | coding | upstream | 939035 | 30911393 ~ 30988951 (-) |
| bcl11ba | LOC106601761 | coding | upstream | 1558935 | 31567353 ~ 31629055 (-) |
| setd3 | LOC106602337 | coding | upstream | 1645244 | 31653662 ~ 31717607 (-) |
| ccdc85ca | LOC106602325 | coding | upstream | 1724594 | 31730827 ~ 31790808 (-) |
| haus2 | haus2 | coding | upstream | 1806048 | 31814466 ~ 31822631 (-) |
| G1611406 | NA | non-coding | downstream | 712 | 29999779 ~ 30007445 (-) |
| G1611405 | NA | non-coding | downstream | 8406 | 29999533 ~ 29999751 (-) |
| G1611404 | NA | non-coding | downstream | 10363 | 29997309 ~ 29997794 (-) |
| G1611392 | NA | non-coding | downstream | 56412 | 29947400 ~ 29955786 (-) |
| G1611363 | NA | non-coding | downstream | 99509 | 29908334 ~ 29908648 (-) |
| G1611416 | NA | non-coding | upstream | 2107 | 30010525 ~ 30011389 (-) |
| G1611418 | NA | non-coding | upstream | 7824 | 30016242 ~ 30016493 (-) |
| G1611420 | NA | non-coding | upstream | 12880 | 30021298 ~ 30021544 (-) |
| G1611421 | NA | non-coding | upstream | 13374 | 30021792 ~ 30022140 (-) |
| G1611422 | NA | non-coding | upstream | 13773 | 30022191 ~ 30022431 (-) |
| G1611350 | NA | other | downstream | 121467 | 29886345 ~ 29886690 (-) |
| G1610194 | ttbk2 | other | downstream | 1217744 | 28789421 ~ 28790413 (-) |
| mideasb | elmsan1 | other | downstream | 1276611 | 28704168 ~ 28735490 (-) |
| crip1 | crip1 | other | downstream | 1358093 | 28642288 ~ 28650251 (-) |
| G1611431 | LOC106602420 | other | upstream | 26500 | 30034918 ~ 30035682 (-) |
| G1613218 | NA | other | upstream | 1454703 | 31463121 ~ 31463896 (-) |
| G1613722 | hipl1 | other | upstream | 1711504 | 31719922 ~ 31807247 (-) |
| fbxo34 | fbxo34 | other | upstream | 2007782 | 32013186 ~ 32062575 (-) |
| G1615240 | NA | other | upstream | 2450112 | 32458530 ~ 32461579 (-) |
