G1611427


Basic Information

Item Value
gene id G1611427
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 30029347 ~ 30030802 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1844490
atatatacccaaaatagctttgtatagaagtagtgtcattcagaaaaattcatcgtttttaaacgctgcgtaattttttaaaattaaaaaagtcgacgataaactttcacaaaacacttcgaaatccttttgtaatccaactttaggtattagtaaacgtttataatctatcaaaacgattacagggcgatgtctcttcaataggtcctcacttcaaaaacaatgcaatctgatctctccctgaactgcatccgggtgaagactggagaACTTGGGGTCAGAcggatggattttccaacaattaattcgattgaaaattagtacaatggcgccatcgtgcggaatttgtagaCGGTGCAGGCAAATtcccattaaattctgttctcctttaacaactggtggaagtgacttatggaaattattttttgctttcagagagcagtttttcttgcgtttttcaatgaaacacacgctctgttatagtcacagccgtgatttaaccagttttataaacttcagagtgttttctatccacacatactaatcatatgcatatactatattcctggcatgagtagcaggacgctgaaaagttgcgcgatttttaacagaattttcaaaaaaggggggggtagatgtaacaggttttaacaggtgtgccttgttaaaaagtaacttgtggaatttatttccttcttaatgagtttgagccaatcagttgtgttgtgacaaggtaggagtggtatacagaagatagccctatttggtaaaagaccaagtccatataatggcaaaAACACaggaaagaagacccagagttacctctgctgcagaagatacattcattagagttagcctcagaaattgcagcccaaataaatacttcagagttcaagtaacagacacatctcaacatcaaatgttcagaggagCCTGAgcgaatcaggccttcgtggtcgaactgctgcaaagaaaccactactaaaggacaccaataagaagaagagaattGCTTGGGGCAAAAAacccaagcaatggacattagaggtgtgatggtgctttgctggtgacactgtctgaaatttatttagaattcaatgcacacttaaccagcatggctaccacagtacgctgcagcgatacgccatcccatctggtgtgCACTTAgtagactatcatttgtttttcaacaggacaatgacccaacacactttccaggctgtgtaagggctatttgaccaagaaggaatgtgatggagtgctgcatcagatgaccttgtctccacaatcacccgacctcaacccaattgagatggtttgggatgagttggaccgcagagtgaaggaaaagcagccagcaagtgctcagcatatgtgggaactcattcaagactgttggaaaagcattccaggtgaagttggttgagagaatgccaagagtgtgcaaagatgttat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1844490 True 1456 lncRNA 0.40 1 30029347 30030802

Neighbor

gene id symbol gene type direction distance location
LOC110498326 LOC106602473 coding downstream 300094 29717062 ~ 29729253 (-)
LOC110498568 NA coding downstream 817240 29208824 ~ 29212107 (-)
LOC110497635 LOC106602575 coding downstream 938858 29008815 ~ 29090489 (-)
LOC110497632 snap23 coding downstream 1071617 28935079 ~ 28957730 (-)
tmem62 tmem62 coding downstream 1263144 28757259 ~ 28766203 (-)
si:dkey-288a3.2 LOC106601776 coding upstream 916651 30911393 ~ 30988951 (-)
bcl11ba LOC106601761 coding upstream 1536551 31567353 ~ 31629055 (-)
setd3 LOC106602337 coding upstream 1622860 31653662 ~ 31717607 (-)
ccdc85ca LOC106602325 coding upstream 1702210 31730827 ~ 31790808 (-)
haus2 haus2 coding upstream 1783664 31814466 ~ 31822631 (-)
G1611426 NA non-coding downstream 243 30028885 ~ 30029104 (-)
G1611425 NA non-coding downstream 5067 30024041 ~ 30024280 (-)
G1611423 NA non-coding downstream 6495 30022538 ~ 30022852 (-)
G1611422 NA non-coding downstream 6916 30022191 ~ 30022431 (-)
G1611421 NA non-coding downstream 7207 30021792 ~ 30022140 (-)
G1611430 NA non-coding upstream 3165 30033967 ~ 30034175 (-)
G1611435 LOC106611270 non-coding upstream 8158 30038960 ~ 30039753 (-)
G1611436 NA non-coding upstream 9543 30040345 ~ 30040625 (-)
G1611438 NA non-coding upstream 13091 30043893 ~ 30044929 (-)
G1611397 NA non-coding upstream 22985 30053787 ~ 30055394 (-)
G1611392 NA other downstream 73561 29947400 ~ 29955786 (-)
G1611350 NA other downstream 142657 29886345 ~ 29886690 (-)
G1610194 ttbk2 other downstream 1238934 28789421 ~ 28790413 (-)
mideasb elmsan1 other downstream 1297801 28704168 ~ 28735490 (-)
crip1 crip1 other downstream 1379283 28642288 ~ 28650251 (-)
G1611431 LOC106602420 other upstream 4116 30034918 ~ 30035682 (-)
G1613218 NA other upstream 1432319 31463121 ~ 31463896 (-)
G1613722 hipl1 other upstream 1689120 31719922 ~ 31807247 (-)
fbxo34 fbxo34 other upstream 1985398 32013186 ~ 32062575 (-)
G1615240 NA other upstream 2427728 32458530 ~ 32461579 (-)

Expression


Co-expression Network