Gene
RNA
| Item | Value |
|---|---|
| gene id | G1611435 |
| gene name | LOC106611270 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 30038960 ~ 30039753 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| endoribonuclease Dicer isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1844498 | True | 794 | lncRNA | 0.48 | 1 | 30038960 | 30039753 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498326 | LOC106602473 | coding | downstream | 309707 | 29717062 ~ 29729253 (-) |
| LOC110498568 | NA | coding | downstream | 826853 | 29208824 ~ 29212107 (-) |
| LOC110497635 | LOC106602575 | coding | downstream | 948471 | 29008815 ~ 29090489 (-) |
| LOC110497632 | snap23 | coding | downstream | 1081230 | 28935079 ~ 28957730 (-) |
| tmem62 | tmem62 | coding | downstream | 1272757 | 28757259 ~ 28766203 (-) |
| si:dkey-288a3.2 | LOC106601776 | coding | upstream | 907700 | 30911393 ~ 30988951 (-) |
| bcl11ba | LOC106601761 | coding | upstream | 1527600 | 31567353 ~ 31629055 (-) |
| setd3 | LOC106602337 | coding | upstream | 1613909 | 31653662 ~ 31717607 (-) |
| ccdc85ca | LOC106602325 | coding | upstream | 1693259 | 31730827 ~ 31790808 (-) |
| haus2 | haus2 | coding | upstream | 1774713 | 31814466 ~ 31822631 (-) |
| G1611430 | NA | non-coding | downstream | 4785 | 30033967 ~ 30034175 (-) |
| G1611427 | NA | non-coding | downstream | 8158 | 30029347 ~ 30030802 (-) |
| G1611426 | NA | non-coding | downstream | 9856 | 30028885 ~ 30029104 (-) |
| G1611425 | NA | non-coding | downstream | 14680 | 30024041 ~ 30024280 (-) |
| G1611423 | NA | non-coding | downstream | 16108 | 30022538 ~ 30022852 (-) |
| G1611436 | NA | non-coding | upstream | 592 | 30040345 ~ 30040625 (-) |
| G1611438 | NA | non-coding | upstream | 4140 | 30043893 ~ 30044929 (-) |
| G1611397 | NA | non-coding | upstream | 14034 | 30053787 ~ 30055394 (-) |
| G1611440 | NA | non-coding | upstream | 23178 | 30062931 ~ 30063134 (-) |
| G1611442 | NA | non-coding | upstream | 28743 | 30068496 ~ 30069227 (-) |
| G1611431 | LOC106602420 | other | downstream | 3278 | 30034918 ~ 30035682 (-) |
| G1611392 | NA | other | downstream | 83174 | 29947400 ~ 29955786 (-) |
| G1611350 | NA | other | downstream | 152270 | 29886345 ~ 29886690 (-) |
| G1610194 | ttbk2 | other | downstream | 1248547 | 28789421 ~ 28790413 (-) |
| mideasb | elmsan1 | other | downstream | 1307414 | 28704168 ~ 28735490 (-) |
| G1613218 | NA | other | upstream | 1423368 | 31463121 ~ 31463896 (-) |
| G1613722 | hipl1 | other | upstream | 1680169 | 31719922 ~ 31807247 (-) |
| fbxo34 | fbxo34 | other | upstream | 1976447 | 32013186 ~ 32062575 (-) |
| G1615240 | NA | other | upstream | 2418777 | 32458530 ~ 32461579 (-) |
| G1615357 | LOC106602003 | other | upstream | 2611173 | 32650926 ~ 32657769 (-) |
