Gene
RNA
| Item | Value |
|---|---|
| gene id | G1611880 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 30403596 ~ 30404054 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1844952 | True | 459 | lncRNA | 0.34 | 1 | 30403596 | 30404054 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498326 | LOC106602473 | coding | downstream | 674343 | 29717062 ~ 29729253 (-) |
| LOC110498568 | NA | coding | downstream | 1191489 | 29208824 ~ 29212107 (-) |
| LOC110497635 | LOC106602575 | coding | downstream | 1313107 | 29008815 ~ 29090489 (-) |
| LOC110497632 | snap23 | coding | downstream | 1445866 | 28935079 ~ 28957730 (-) |
| tmem62 | tmem62 | coding | downstream | 1637393 | 28757259 ~ 28766203 (-) |
| si:dkey-288a3.2 | LOC106601776 | coding | upstream | 543399 | 30911393 ~ 30988951 (-) |
| bcl11ba | LOC106601761 | coding | upstream | 1163299 | 31567353 ~ 31629055 (-) |
| setd3 | LOC106602337 | coding | upstream | 1249608 | 31653662 ~ 31717607 (-) |
| ccdc85ca | LOC106602325 | coding | upstream | 1328958 | 31730827 ~ 31790808 (-) |
| haus2 | haus2 | coding | upstream | 1410412 | 31814466 ~ 31822631 (-) |
| G1611872 | NA | non-coding | downstream | 5699 | 30397687 ~ 30397897 (-) |
| G1611865 | NA | non-coding | downstream | 8929 | 30394435 ~ 30394667 (-) |
| G1611855 | NA | non-coding | downstream | 16235 | 30387085 ~ 30387361 (-) |
| G1611851 | NA | non-coding | downstream | 18351 | 30385006 ~ 30385245 (-) |
| G1611825 | NA | non-coding | downstream | 37189 | 30366190 ~ 30366407 (-) |
| G1611899 | NA | non-coding | upstream | 5488 | 30409542 ~ 30421278 (-) |
| G1612280 | NA | non-coding | upstream | 288671 | 30692725 ~ 30695032 (-) |
| G1612300 | NA | non-coding | upstream | 310139 | 30714193 ~ 30714428 (-) |
| G1612309 | NA | non-coding | upstream | 314312 | 30718366 ~ 30718614 (-) |
| G1612336 | NA | non-coding | upstream | 335358 | 30739412 ~ 30739667 (-) |
| G1611431 | LOC106602420 | other | downstream | 367914 | 30034918 ~ 30035682 (-) |
| G1611392 | NA | other | downstream | 447810 | 29947400 ~ 29955786 (-) |
| G1611350 | NA | other | downstream | 516906 | 29886345 ~ 29886690 (-) |
| G1610194 | ttbk2 | other | downstream | 1613183 | 28789421 ~ 28790413 (-) |
| mideasb | elmsan1 | other | downstream | 1672050 | 28704168 ~ 28735490 (-) |
| G1613218 | NA | other | upstream | 1059067 | 31463121 ~ 31463896 (-) |
| G1613722 | hipl1 | other | upstream | 1315868 | 31719922 ~ 31807247 (-) |
| fbxo34 | fbxo34 | other | upstream | 1612146 | 32013186 ~ 32062575 (-) |
| G1615240 | NA | other | upstream | 2054476 | 32458530 ~ 32461579 (-) |
| G1615357 | LOC106602003 | other | upstream | 2246872 | 32650926 ~ 32657769 (-) |
