Gene
RNA
| Item | Value |
|---|---|
| gene id | G1612336 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 30739412 ~ 30739667 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1845429 | True | 256 | lncRNA | 0.39 | 1 | 30739412 | 30739667 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110498326 | LOC106602473 | coding | downstream | 1010159 | 29717062 ~ 29729253 (-) |
| LOC110498568 | NA | coding | downstream | 1527305 | 29208824 ~ 29212107 (-) |
| LOC110497635 | LOC106602575 | coding | downstream | 1648923 | 29008815 ~ 29090489 (-) |
| LOC110497632 | snap23 | coding | downstream | 1781682 | 28935079 ~ 28957730 (-) |
| tmem62 | tmem62 | coding | downstream | 1973209 | 28757259 ~ 28766203 (-) |
| si:dkey-288a3.2 | LOC106601776 | coding | upstream | 207786 | 30911393 ~ 30988951 (-) |
| bcl11ba | LOC106601761 | coding | upstream | 827686 | 31567353 ~ 31629055 (-) |
| setd3 | LOC106602337 | coding | upstream | 913995 | 31653662 ~ 31717607 (-) |
| ccdc85ca | LOC106602325 | coding | upstream | 993345 | 31730827 ~ 31790808 (-) |
| haus2 | haus2 | coding | upstream | 1074799 | 31814466 ~ 31822631 (-) |
| G1612309 | NA | non-coding | downstream | 20798 | 30718366 ~ 30718614 (-) |
| G1612300 | NA | non-coding | downstream | 24984 | 30714193 ~ 30714428 (-) |
| G1612280 | NA | non-coding | downstream | 44380 | 30692725 ~ 30695032 (-) |
| G1611899 | NA | non-coding | downstream | 318134 | 30409542 ~ 30421278 (-) |
| G1611880 | NA | non-coding | downstream | 335358 | 30403596 ~ 30404054 (-) |
| G1612349 | NA | non-coding | upstream | 6537 | 30746204 ~ 30746405 (-) |
| G1612367 | NA | non-coding | upstream | 17396 | 30757063 ~ 30757425 (-) |
| G1612631 | NA | non-coding | upstream | 105597 | 30845264 ~ 30892092 (-) |
| G1612665 | NA | non-coding | upstream | 168760 | 30908427 ~ 30908778 (-) |
| G1611431 | LOC106602420 | other | downstream | 703730 | 30034918 ~ 30035682 (-) |
| G1611392 | NA | other | downstream | 783626 | 29947400 ~ 29955786 (-) |
| G1611350 | NA | other | downstream | 852722 | 29886345 ~ 29886690 (-) |
| G1610194 | ttbk2 | other | downstream | 1948999 | 28789421 ~ 28790413 (-) |
| mideasb | elmsan1 | other | downstream | 2007866 | 28704168 ~ 28735490 (-) |
| G1613218 | NA | other | upstream | 723454 | 31463121 ~ 31463896 (-) |
| G1613722 | hipl1 | other | upstream | 980255 | 31719922 ~ 31807247 (-) |
| fbxo34 | fbxo34 | other | upstream | 1276533 | 32013186 ~ 32062575 (-) |
| G1615240 | NA | other | upstream | 1718863 | 32458530 ~ 32461579 (-) |
| G1615357 | LOC106602003 | other | upstream | 1911259 | 32650926 ~ 32657769 (-) |
