G1613345 (LOC106602337)


Basic Information

Item Value
gene id G1613345
gene name LOC106602337
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 31657491 ~ 31662063 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1846473
CTGGTCTTGTAGGTCTGGAGCAGCAGGGCAGCCCTGGTCTCCAGGAAAGTCCACAGTTTGATCTCATTGTCCCAGCTCACAGGGAACTCGGTGTTTCCCAGGGTGAAGATCTTATTGATGGCATGTTCTCCTACCAGGTAGTCCTTCAGCTCTTCCTCGGTCATACAGAAGACTCTGAGGAAGGCCAACAGCTGGGCAGAGATTGGAGGATCGCTGCAGTGCAGGGCAAAGATACTAGACGAGGGGATGCCAGCGCGAGCCAGCACCTCCGCCTTCATGGCGTACAGCCGTTCACTCTTGGACACGCCCAGTTTGATCTTGACCCTGTCGTGGGCGTTCTCCTGGAAGAAGAAGCCGTTGTGGATCACAAACTCAGCGTTGGACCGCGTCCCATAGAA

Function

NR:

description
PREDICTED: histone-lysine N-methyltransferase setd3-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1846473 True 398 TUCP 0.56 3 31657491 31662063

Neighbor

gene id symbol gene type direction distance location
vrk1 LOC106602366 coding upstream 653320 30989018 ~ 31005731 (+)
ak7b ak7 coding upstream 738218 30904207 ~ 30919273 (+)
galcb galc coding upstream 753288 30896132 ~ 30904203 (+)
si:dkey-87k14.1 flrt2 coding upstream 1028782 30572581 ~ 30628709 (+)
LOC110498569 LOC106588994 coding upstream 1468409 30188767 ~ 30189082 (+)
LOC110497653 ccnk coding downstream 55767 31717830 ~ 31724729 (+)
hhipl1 hipl1 coding downstream 135263 31797326 ~ 31807247 (+)
trnat-ugu-40 NA coding downstream 149441 31811504 ~ 31811575 (+)
LOC110497657 LOC106602319 coding downstream 159596 31821659 ~ 31830167 (+)
LOC110497658 LOC106602312 coding downstream 170444 31832507 ~ 31860296 (+)
G1613344 LOC106602337 non-coding upstream 159 31655168 ~ 31657332 (+)
G1613343 NA non-coding upstream 4540 31652219 ~ 31652951 (+)
G1613342 NA non-coding upstream 6565 31650722 ~ 31650926 (+)
G1613340 NA non-coding upstream 9519 31647771 ~ 31647972 (+)
G1613339 NA non-coding upstream 10719 31646553 ~ 31646772 (+)
G1613388 NA non-coding downstream 68796 31730859 ~ 31780333 (+)
G1613414 NA non-coding downstream 169440 31831503 ~ 31832438 (+)
G1613420 LOC100136012 non-coding downstream 198486 31860549 ~ 31861769 (+)
G1613463 NA non-coding downstream 204690 31866753 ~ 31867099 (+)
G1613190 NA other upstream 218921 31438260 ~ 31438570 (+)
dicer1 LOC106602420 other upstream 1618862 29999673 ~ 30051255 (+)
G1610813 NA other upstream 1753769 29903207 ~ 29903722 (+)
G1610576 NA other upstream 2296756 29360278 ~ 29360735 (+)
timm9 timm9 other downstream 707395 32369230 ~ 32375682 (+)
G1614241 LOC106602099 other downstream 940415 32602478 ~ 32610417 (+)
cfl2 LOC106602033 other downstream 1025771 32687789 ~ 32693112 (+)
G1614510 NA other downstream 1448198 33110261 ~ 33110861 (+)

Expression


Co-expression Network