G1613722 (hipl1)


Basic Information

Item Value
gene id G1613722
gene name hipl1
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 31719922 ~ 31807247 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1846906
TGAGTCTGTATGGAGCATTTATTTCAGTATGTGATCATGAGAGAATATTAAATAACCTGGTATTCATTCTccttatacagtatattcattcatTTACTGTTTTAGATTCATTTCCTTTAGAGAAAGCATTGTCTTACATTAGCAAAGTCTAACATTTTAATTATAAAACCTTTAAGACTTTAACGCAGCAATTAAATCAGCATTACATTACCTTAATGAAAAGAGGTAGACCTACAAGTGCCAACATCGACAACAATTAGACAAAAGTTAGACAGCAATATGCCTTGGTTTTAGTTACAATCACTTAGGCCACAGTCACAAATAAATTCAATCACCTCTCAATCGACTCTCATTTCTAGGCATCAACGTAGTCTGAGTTCCCGCATATCACCCCTGCGTCCTCGTAATGGGCACAGTTATGTATTCCTATGTCTGTGTGTTGACAGTCCAGCAGGCTCTCCTCTGTGCCCTCACACTGCACATCGTCCAGAAGAATCCGGAGACTCTTCCCTTCTCCAAACTCAGAGTGCTTGGATGCCTTCAGGGCGAATCGGAACCCCAGCTGCCGACATACCACTGCCGCGTTCTTCGTATTCCACAGGTCGTCGCACACCGTACCCCATTCACCATTGACAAAGATCTCCACCCTCCCCCGccagaagaggaccggccacccctcatagcctggttcctctctaggtttcttcctaggttttggcctttctagggagtttttcctagccactgtgtttctacacctgcagtgcttgctgtttggggttttaggctgggtttctgtacagcactttgagatatcagctgatgtaagaagggatttataaataaatttgatttggaaaaattattggaaccatttccctgtttgaccgctaagTTATGGGTATTATATctcctccactgtggggctctataacaCTGCAATAAGCAAACAGCCCACAAAATGAAGTGTTAATCAAAGTGGTGTGAAAGAGACCTTTGAAAGAGGCATACTTTTGTCTTTAAAGTCTAAAAACAGCCTTACACAAATGACGAAACCAGAGAAgtgctcgagagagagagagagagagagagatagagaaggagagaacagcCAGTACCACCTTCCAGCAGCTCCACTGGGACATCCTGGACAAACTGTTCCCACCATCGCCGTGAAGACTGCTTGGACGTCCACTCCTGGATGTCAAACTTACACAGCCGGCCGGCCAGGTACATGACTGCTACAGCTATGATCTCTGGTTCCCACTGTAGGGACAGCATGGTGCACaagctgTTCACAAAGGTCCAGGCCATCTGAACTAG

Function

NR:

description
HHIP-like protein 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1846906 True 1323 TUCP 0.45 3 31719922 31807247

Neighbor

gene id symbol gene type direction distance location
setd3 LOC106602337 coding downstream 2315 31653662 ~ 31717607 (-)
bcl11ba LOC106601761 coding downstream 90867 31567353 ~ 31629055 (-)
si:dkey-288a3.2 LOC106601776 coding downstream 730971 30911393 ~ 30988951 (-)
LOC110498326 LOC106602473 coding downstream 1990669 29717062 ~ 29729253 (-)
LOC110498568 NA coding downstream 2507815 29208824 ~ 29212107 (-)
haus2 haus2 coding upstream 7219 31814466 ~ 31822631 (-)
jmjd7 jmjd7 coding upstream 180228 31987475 ~ 31994210 (-)
fbxo34 fbxo34 coding upstream 205939 32013186 ~ 32062575 (-)
lgals3b LOC106602243 coding upstream 257251 32064498 ~ 32077555 (-)
dact1 dact1 coding upstream 382380 32189627 ~ 32205732 (-)
G1613689 NA non-coding downstream 67143 31652039 ~ 31652779 (-)
G1613686 NA non-coding downstream 74049 31645641 ~ 31645873 (-)
G1613680 NA non-coding downstream 81355 31638360 ~ 31638567 (-)
G1613623 NA non-coding downstream 182438 31537253 ~ 31537484 (-)
G1613770 NA non-coding upstream 24254 31831501 ~ 31832436 (-)
G1613798 LOC106584099 non-coding upstream 54687 31861934 ~ 31863457 (-)
G1613804 LOC106602308 non-coding upstream 75101 31882348 ~ 31882886 (-)
G1613850 NA non-coding upstream 127407 31934654 ~ 31938245 (-)
G1613876 LOC106602280 non-coding upstream 172093 31979340 ~ 31980194 (-)
G1613218 NA other downstream 256026 31463121 ~ 31463896 (-)
G1611431 LOC106602420 other downstream 1684240 30034918 ~ 30035682 (-)
G1611392 NA other downstream 1764136 29947400 ~ 29955786 (-)
G1611350 NA other downstream 1833232 29886345 ~ 29886690 (-)
G1610194 ttbk2 other downstream 2929509 28789421 ~ 28790413 (-)
G1615240 NA other upstream 651283 32458530 ~ 32461579 (-)
G1615357 LOC106602003 other upstream 843679 32650926 ~ 32657769 (-)
LOC110497688 npas3 other upstream 964670 32770921 ~ 33161896 (-)
G1615793 NA other upstream 1604972 33412219 ~ 33413217 (-)

Expression


Co-expression Network