Gene
RNA
| Item | Value |
|---|---|
| gene id | G1613915 |
| gene name | LOC106579309 |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048583.1 |
| NCBI id | CM023237.2 |
| chromosome length | 67237266 |
| location | 32093349 ~ 32093618 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| tubulin tyrosine ligase-like family member 6a |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1847134 | True | 270 | lncRNA | 0.49 | 1 | 32093349 | 32093618 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| lgals3b | LOC106602243 | coding | downstream | 15794 | 32064498 ~ 32077555 (-) |
| fbxo34 | fbxo34 | coding | downstream | 30774 | 32013186 ~ 32062575 (-) |
| jmjd7 | jmjd7 | coding | downstream | 99139 | 31987475 ~ 31994210 (-) |
| haus2 | haus2 | coding | downstream | 270718 | 31814466 ~ 31822631 (-) |
| ccdc85ca | LOC106602325 | coding | downstream | 302541 | 31730827 ~ 31790808 (-) |
| dact1 | dact1 | coding | upstream | 96009 | 32189627 ~ 32205732 (-) |
| kiaa0586 | kiaa0586 | coding | upstream | 128879 | 32222497 ~ 32369182 (-) |
| irf2bpl | LOC106602196 | coding | upstream | 252290 | 32345908 ~ 32349044 (-) |
| arid4a | arid4a | coding | upstream | 282648 | 32376266 ~ 32398733 (-) |
| LOC110497673 | psma3 | coding | upstream | 307297 | 32400915 ~ 32414594 (-) |
| G1613813 | NA | non-coding | downstream | 86122 | 32006442 ~ 32007227 (-) |
| G1613884 | NA | non-coding | downstream | 90887 | 32002226 ~ 32002462 (-) |
| G1613883 | NA | non-coding | downstream | 91845 | 32001174 ~ 32001504 (-) |
| G1613880 | LOC106602264 | non-coding | downstream | 92961 | 31999922 ~ 32000388 (-) |
| G1613876 | LOC106602280 | non-coding | downstream | 113155 | 31979340 ~ 31980194 (-) |
| G1613919 | NA | non-coding | upstream | 4773 | 32098391 ~ 32098686 (-) |
| G1613936 | NA | non-coding | upstream | 37488 | 32131106 ~ 32131311 (-) |
| G1615089 | NA | non-coding | upstream | 87713 | 32181331 ~ 32181607 (-) |
| G1615091 | NA | non-coding | upstream | 88966 | 32182584 ~ 32182784 (-) |
| G1615094 | NA | non-coding | upstream | 93609 | 32187227 ~ 32187461 (-) |
| G1613722 | hipl1 | other | downstream | 286102 | 31719922 ~ 31807247 (-) |
| G1613218 | NA | other | downstream | 629453 | 31463121 ~ 31463896 (-) |
| G1611431 | LOC106602420 | other | downstream | 2057667 | 30034918 ~ 30035682 (-) |
| G1611392 | NA | other | downstream | 2137563 | 29947400 ~ 29955786 (-) |
| G1615240 | NA | other | upstream | 364912 | 32458530 ~ 32461579 (-) |
| G1615357 | LOC106602003 | other | upstream | 557308 | 32650926 ~ 32657769 (-) |
| LOC110497688 | npas3 | other | upstream | 678299 | 32770921 ~ 33161896 (-) |
| G1615793 | NA | other | upstream | 1318601 | 33412219 ~ 33413217 (-) |
| G1615810 | hectd1 | other | upstream | 1384975 | 33478593 ~ 33479436 (-) |
