G1615073



Basic Information


Item Value
gene id G1615073
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 32188202 ~ 32189346 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1848429
tattttacattcttcaaagtaaagaagccaccctttgccttgacagctttgcacttggcattctctcaaccagcttcacgaggtaggcacctgggaaacatttaaatgaacaggtgtgccttgttaatttgtggaatttctttccttcttaatgcatttgagccaatcagatgtgttgtgacaaggtaggggttgtatacagaagatggtcttttaccaaaaatgtccttattatggcaagaacagcttgaataagcaaagagaaacaactgtccatcattactttaagacatgaaggtcagtccatccagaacatttcaataaccttcaagtgctatgatgaaactgactctaatgaggaccgccacagggaaggaagacccagagttaacactgctgcaaaggataagttcctcagaaattgcagccaaaataaatacttcagagttcaagtaacagacacatctcaacctcaATTGTTCAGAAGAAactgcgtgaatcaagccttcatgctcaatattgctgcaaagaaaccattactacaGGACACCAGTAATAAGCGAGACTtgttgtcctttggtctgatgactcccaatttgagatttttgcttccaaccactgtgtctttgtgagacgcagagtaggtgaatgaatgatctctgcatgtgtggttccctctgtgaagcatggaggaggtgtgagggtgctttgctggtgactctgtctgtgatttattgagaattcaaggcacacttaaccaacgtggctaccacagcattctgcagcgatacaccatcccatcaaggtttgtgcttagtgggactagaattagtttttcaacaggacaatgacccaacacacctccatgctgtgtaagggctatttgaacaaggagagtgatggagtgctgcatcaaatctggcctccacaatcacccgagttcaacccaattgagatggtttgggttgagttggaccgcagagtgaaggaaaagcagccaacaagtgctcagcatacgtgggaactccttcaagactgttggaaaagcattccaggtgaagttggttgagagaatgccaagaatgtgcaaagatgtcaaggcaaagggtggctactttgaagaatctaaaatatattttgatttg

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1848429 True 1145 lncRNA 0.43 1 32188202 32189346

Neighbor


gene id symbol gene type direction distance location
lgals3b LOC106602243 coding downstream 110647 32064498 ~ 32077555 (-)
fbxo34 fbxo34 coding downstream 125627 32013186 ~ 32062575 (-)
jmjd7 jmjd7 coding downstream 193992 31987475 ~ 31994210 (-)
haus2 haus2 coding downstream 365571 31814466 ~ 31822631 (-)
ccdc85ca LOC106602325 coding downstream 397394 31730827 ~ 31790808 (-)
dact1 dact1 coding upstream 281 32189627 ~ 32205732 (-)
kiaa0586 kiaa0586 coding upstream 33151 32222497 ~ 32369182 (-)
irf2bpl LOC106602196 coding upstream 156562 32345908 ~ 32349044 (-)
arid4a arid4a coding upstream 186920 32376266 ~ 32398733 (-)
LOC110497673 psma3 coding upstream 211569 32400915 ~ 32414594 (-)
G1615094 NA non-coding downstream 741 32187227 ~ 32187461 (-)
G1615091 NA non-coding downstream 5418 32182584 ~ 32182784 (-)
G1615089 NA non-coding downstream 6595 32181331 ~ 32181607 (-)
G1613936 NA non-coding downstream 56891 32131106 ~ 32131311 (-)
G1613919 NA non-coding downstream 89516 32098391 ~ 32098686 (-)
G1615103 NA non-coding upstream 17240 32206586 ~ 32206874 (-)
G1615110 NA non-coding upstream 23087 32212433 ~ 32212664 (-)
G1615114 NA non-coding upstream 26350 32215696 ~ 32216053 (-)
G1615128 NA non-coding upstream 43618 32232964 ~ 32234351 (-)
G1615148 NA non-coding upstream 77028 32266374 ~ 32266918 (-)
G1613722 hipl1 other downstream 380955 31719922 ~ 31807247 (-)
G1613218 NA other downstream 724306 31463121 ~ 31463896 (-)
G1611431 LOC106602420 other downstream 2152520 30034918 ~ 30035682 (-)
G1611392 NA other downstream 2232416 29947400 ~ 29955786 (-)
G1615240 NA other upstream 269184 32458530 ~ 32461579 (-)
G1615357 LOC106602003 other upstream 461580 32650926 ~ 32657769 (-)
LOC110497688 npas3 other upstream 582571 32770921 ~ 33161896 (-)
G1615793 NA other upstream 1222873 33412219 ~ 33413217 (-)
G1615810 hectd1 other upstream 1289247 33478593 ~ 33479436 (-)

Expression



Co-expression Network