G1615110



Basic Information


Item Value
gene id G1615110
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048583.1
NCBI id CM023237.2
chromosome length 67237266
location 32212433 ~ 32212664 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1848466
GTGGAATGAACAAAGATCAATTAACCTGATTCCTTTGTTGTCCTCGTGAGAAGATAGCTTAGTCATGTGAAACATTCTGTGTGCTGTTTATGTAAATCATTATTGCACTGTATTACCATAGAAATCAATTTCAACATTTCTCAAAATTAGCCTTCGCTTGTTCTTGACGATTCATATCAGCAGTTCTACATGGCTCTATGTGTTACTGTCAGAGAGTAGGAAGGAAGAGGGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1848466 True 232 lncRNA 0.37 1 32212433 32212664

Neighbor


gene id symbol gene type direction distance location
dact1 dact1 coding downstream 6701 32189627 ~ 32205732 (-)
lgals3b LOC106602243 coding downstream 134878 32064498 ~ 32077555 (-)
fbxo34 fbxo34 coding downstream 149858 32013186 ~ 32062575 (-)
jmjd7 jmjd7 coding downstream 218223 31987475 ~ 31994210 (-)
haus2 haus2 coding downstream 389802 31814466 ~ 31822631 (-)
kiaa0586 kiaa0586 coding upstream 9833 32222497 ~ 32369182 (-)
irf2bpl LOC106602196 coding upstream 133244 32345908 ~ 32349044 (-)
arid4a arid4a coding upstream 163602 32376266 ~ 32398733 (-)
LOC110497673 psma3 coding upstream 188251 32400915 ~ 32414594 (-)
LOC110497675 foxa1 coding upstream 290275 32502939 ~ 32506011 (-)
G1615103 NA non-coding downstream 5559 32206586 ~ 32206874 (-)
G1615073 NA non-coding downstream 23087 32188202 ~ 32189346 (-)
G1615094 NA non-coding downstream 24972 32187227 ~ 32187461 (-)
G1615091 NA non-coding downstream 29649 32182584 ~ 32182784 (-)
G1615089 NA non-coding downstream 30826 32181331 ~ 32181607 (-)
G1615114 NA non-coding upstream 3032 32215696 ~ 32216053 (-)
G1615128 NA non-coding upstream 20300 32232964 ~ 32234351 (-)
G1615148 NA non-coding upstream 53710 32266374 ~ 32266918 (-)
G1615162 NA non-coding upstream 83426 32296090 ~ 32303671 (-)
G1615191 NA non-coding upstream 145654 32358318 ~ 32358641 (-)
G1613722 hipl1 other downstream 405186 31719922 ~ 31807247 (-)
G1613218 NA other downstream 748537 31463121 ~ 31463896 (-)
G1611431 LOC106602420 other downstream 2176751 30034918 ~ 30035682 (-)
G1611392 NA other downstream 2256647 29947400 ~ 29955786 (-)
G1615240 NA other upstream 245866 32458530 ~ 32461579 (-)
G1615357 LOC106602003 other upstream 438262 32650926 ~ 32657769 (-)
LOC110497688 npas3 other upstream 559253 32770921 ~ 33161896 (-)
G1615793 NA other upstream 1199555 33412219 ~ 33413217 (-)
G1615810 hectd1 other upstream 1265929 33478593 ~ 33479436 (-)

Expression



Co-expression Network